Lineage for d35c8h1 (35c8 H:1-113)

  1. Root: SCOPe 2.06
  2. 2017114Class b: All beta proteins [48724] (177 folds)
  3. 2017115Fold b.1: Immunoglobulin-like beta-sandwich [48725] (33 superfamilies)
    sandwich; 7 strands in 2 sheets; greek-key
    some members of the fold have additional strands
  4. 2017116Superfamily b.1.1: Immunoglobulin [48726] (5 families) (S)
  5. 2017117Family b.1.1.1: V set domains (antibody variable domain-like) [48727] (33 protein domains)
  6. 2017323Protein Immunoglobulin heavy chain variable domain, VH [88543] (21 species)
    VH domains of human and mouse antibodies are clustered by the sequence similarity within the germline encoded segment and then by the size of the complementarity determining regions CDR1 and CDR2, so the clusters may correspond to putative germline families in the species genomes; VH domains with artificial or grafted exogenous CDRs are listed as engineered species
  7. 2017783Species Mouse (Mus musculus), cluster 3.1 [TaxId:10090] [88551] (31 PDB entries)
    SQ NA # natural chimera; best hits are: Uniprot P01751 (Ig heavy chain V region B1-8/186-2) and Uniprot P01864 (Ig gamma-2A chain C region secreted form)
  8. 2017790Domain d35c8h1: 35c8 H:1-113 [20297]
    Other proteins in same PDB: d35c8h2, d35c8l1, d35c8l2
    part of catalytic Fab 5C8
    complexed with nox

Details for d35c8h1

PDB Entry: 35c8 (more details), 2 Å

PDB Description: catalytic antibody 5c8, fab-inhibitor complex
PDB Compounds: (H:) igg 5c8

SCOPe Domain Sequences for d35c8h1:

Sequence; same for both SEQRES and ATOM records: (download)

>d35c8h1 b.1.1.1 (H:1-113) Immunoglobulin heavy chain variable domain, VH {Mouse (Mus musculus), cluster 3.1 [TaxId: 10090]}

SCOPe Domain Coordinates for d35c8h1:

Click to download the PDB-style file with coordinates for d35c8h1.
(The format of our PDB-style files is described here.)

Timeline for d35c8h1:

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