![]() | Class b: All beta proteins [48724] (126 folds) |
![]() | Fold b.1: Immunoglobulin-like beta-sandwich [48725] (20 superfamilies) sandwich; 7 strands in 2 sheets; greek-key some members of the fold have additional strands |
![]() | Superfamily b.1.1: Immunoglobulin [48726] (4 families) ![]() |
![]() | Family b.1.1.1: V set domains (antibody variable domain-like) [48727] (21 proteins) |
![]() | Protein Immunoglobulin light chain kappa variable domain, VL-kappa [88519] (14 species) VL-kappa domains of human and mouse antibodies are clustered by the sequence similarity within the germline encoded segment and then by the size of the complementarity determining regions CDR1 and CDR2, so the clusters may correspond to putative germline families in the species genomes; VL-kappa domains with artificial or grafted exogeneous CDRs are listed as engineered species |
![]() | Species Mouse (Mus musculus), cluster 1.1 [TaxId:10090] [88524] (98 PDB entries) |
![]() | Domain d1a4ja1: 1a4j A:1-112 [20232] Other proteins in same PDB: d1a4ja2, d1a4jb1, d1a4jb2, d1a4jh1, d1a4jh2, d1a4jl2 part of humanized Diels-Alder catalytic Fab; germline precursor |
PDB Entry: 1a4j (more details), 2.1 Å
SCOP Domain Sequences for d1a4ja1:
Sequence; same for both SEQRES and ATOM records: (download)
>d1a4ja1 b.1.1.1 (A:1-112) Immunoglobulin light chain kappa variable domain, VL-kappa {Mouse (Mus musculus), cluster 1.1} elvmtqtplslpvslgdqasiscrssqslvhsngntylhwylqkpgqspklliykvsnrf sgvpdrfsgsgsgtdftlkisrveaedlgvyfcsqsthvpptfgggtkleik
Timeline for d1a4ja1: