SCOPe 2.06: Domain d4gfsb_: 4gfs B:

Lineage for d4gfsb_ (4gfs B:)

1. Root: SCOPe 2.06

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
   contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
   the first seven superfamilies have similar phosphate-binding sites

4. Superfamily c.1.10: Aldolase [51569] (9 families)
   Common fold covers whole protein structure

5. Family c.1.10.1: Class I aldolase [51570] (13 proteins)
   the catalytic lysine forms schiff-base intermediate with substrate
   possible link between the aldolase superfamily and the phosphate-binding beta/alpha barrels

6. Protein automated matches [190095] (24 species)
   not a true protein

7. Species Salmonella enterica [TaxId:99287] [189300] (4 PDB entries)

8. Domain d4gfsb_: 4gfs B: [202260]
   automated match to d3m7wd_
   complexed with ni, sin

Details for d4gfsb_

PDB Entry: 4gfs, 1.8 Å

PDB Description: 1.8 Angstrom Crystal Structure of the 3-Dehydroquinate Dehydratase (aroD) from Salmonella typhimurium LT2 with Nickel Bound at Active Site

PDB Compounds: (B:) 3-dehydroquinate dehydratase

SCOPe Domain Sequences for d4gfsb_:

Sequence, based on SEQRES records:

>d4gfsb_ c.1.10.1 (B:) automated matches {Salmonella enterica [TaxId: 99287]}
mktvtvrdlvvgegapkiivslmgktitdvksealayreadfdilewrvdhfanvttaes
vleaagaireiitdkpllftfrsakeggeqalttgqyidlnraavdsglvdmidlelftg
ddevkatvgyahqhnvavimsnhdfhktpaaeeivqrlrkmqelgadipkiavmpqtkad
vltlltatvemqeryadrpiitmsmsktgvisrlagevfgsaatfgavkkasapgqisva
dlrtvltilhqa

Sequence, based on observed residues (ATOM records):

>d4gfsb_ c.1.10.1 (B:) automated matches {Salmonella enterica [TaxId: 99287]}
mktvtvrdlvvgegapkiivslmgktitdvksealayreadfdilewrvdhfanvttaes
vleaagaireiitdkpllftfrsakeggeqalttgqyidlnraavdsglvdmidlelftg
ddevkatvgyahqhnvavimsnhdfhktpaaeeivqrlrkmqelgadipkiavmpqtkad
vltlltatvemqeryadrpiitmsmsktgvisrlagevfgsaatfgavkapgqisvadlr
tvltilhqa

Timeline for d4gfsb_:

• d4gfsb_ first appeared in SCOPe 2.03
  
• d4gfsb_ appears in SCOPe 2.05
  
• d4gfsb_ appears in SCOPe 2.07
  
• d4gfsb_ appears in the current release, SCOPe 2.08