SCOPe 2.06: Domain d4gd9a_: 4gd9 A:

Lineage for d4gd9a_ (4gd9 A:)

1. Root: SCOPe 2.06

2. Class b: All beta proteins [48724] (177 folds)

3. Fold b.61: Streptavidin-like [50875] (8 superfamilies)
   barrel, closed; n=8, S=10; meander

4. Superfamily b.61.1: Avidin/streptavidin [50876] (2 families)

5. Family b.61.1.1: Avidin/streptavidin [50877] (3 proteins)

6. Protein automated matches [190191] (2 species)
   not a true protein

7. Species Streptomyces avidinii [TaxId:1895] [189343] (50 PDB entries)

8. Domain d4gd9a_: 4gd9 A: [202237]
   automated match to d4gd9b_
   complexed with btn, so4

Details for d4gd9a_

PDB Entry: 4gd9, 1.5 Å

PDB Description: circular permuted streptavidin n49/g48

PDB Compounds: (A:) streptavidin

SCOPe Domain Sequences for d4gd9a_:

Sequence, based on SEQRES records:

>d4gd9a_ b.61.1.1 (A:) automated matches {Streptomyces avidinii [TaxId: 1895]}
naesryvltgrydsapatdgsgtalgwtvawknnyrnahsattwsgqyvggaearintqw
lltsgtteanawkstlvghdtftkvkpsaasgggsaeagitgtwynqlgstfivtagadg
altgtyesavg

Sequence, based on observed residues (ATOM records):

>d4gd9a_ b.61.1.1 (A:) automated matches {Streptomyces avidinii [TaxId: 1895]}
naesryvltgrydsapatdgsgtalgwtvawknnyrnahsattwsgqyvggaearintqw
lltsgtteanawkstlvghdtftkveagitgtwynqlgstfivtagadgaltgtyesavg

Timeline for d4gd9a_:

• d4gd9a_ first appeared in SCOPe 2.03
  
• d4gd9a_ appears in SCOPe 2.05
  
• d4gd9a_ appears in SCOPe 2.07
  
• d4gd9a_ appears in the current release, SCOPe 2.08