SCOPe 2.03: Domain d4fjvc_: 4fjv C:

Lineage for d4fjvc_ (4fjv C:)

1. Root: SCOPe 2.03

2. Class d: Alpha and beta proteins (a+b) [53931] (376 folds)

3. Fold d.3: Cysteine proteinases [54000] (1 superfamily)
   consists of one alpha-helix and 4 strands of antiparallel beta-sheet and contains the catalytic triad Cys-His-Asn

4. Superfamily d.3.1: Cysteine proteinases [54001] (23 families)
   the constitute families differ by insertion into and circular permutation of the common catalytic core made of one alpha-helix and 3-strands of beta-sheet

5. Family d.3.1.11: Ubiquitin thiolesterase protein OTUB2 (Otubain-2) [110773] (2 proteins)
   probably the same as Pfam PF02338, OTU-like cysteine protease, but 1TFF (Uniprot Q96DC9) was not detected by the Pfam model

6. Protein automated matches [197305] (1 species)
   not a true protein

7. Species Human (Homo sapiens) [TaxId:9606] [197306] (1 PDB entry)

8. Domain d4fjvc_: 4fjv C: [202037]
   Other proteins in same PDB: d4fjvb_, d4fjvd_
   automated match to d4fjva_
   complexed with gol, neh

Details for d4fjvc_

PDB Entry: 4fjv, 2.05 Å

PDB Description: Crystal Structure of Human Otubain2 and Ubiquitin Complex

PDB Compounds: (C:) Ubiquitin thioesterase OTUB2

SCOPe Domain Sequences for d4fjvc_:

Sequence; same for both SEQRES and ATOM records:

>d4fjvc_ d.3.1.11 (C:) automated matches {Human (Homo sapiens) [TaxId: 9606]}
etsfnlisekcdilsilrdhpenriyrrkieelskrftairktkgdgncfyralgysyle
sllgksreifkfkervlqtpndllaagfeehkfrnffnafysvvelvekdgsvssllkvf
ndqsasdhivqflrlltsafirnradffrhfideemdikdfcthevepmatecdhiqita
lsqalsialqveyvdemdtalnhhvfpeaatpsvyllyktshynilyaad

Timeline for d4fjvc_:

• d4fjvc_ is new in SCOPe 2.03-stable
  
• d4fjvc_ appears in SCOPe 2.04
  
• d4fjvc_ appears in the current release, SCOPe 2.08