SCOPe 2.05: Domain d4epbc2: 4epb C:1130-1422,C:1476-1567

Lineage for d4epbc2 (4epb C:1130-1422,C:1476-1567)

1. Root: SCOPe 2.05

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
   contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
   the first seven superfamilies have similar phosphate-binding sites

4. Superfamily c.1.9: Metallo-dependent hydrolases [51556] (19 families)
   the beta-sheet barrel is similarly distorted and capped by a C-terminal helix
   has transition metal ions bound inside the barrel

5. Family c.1.9.2: alpha-subunit of urease, catalytic domain [51560] (1 protein)

6. Protein alpha-subunit of urease, catalytic domain [51561] (4 species)

7. Species Enterobacter aerogenes [TaxId:548] [224877] (4 PDB entries)

8. Domain d4epbc2: 4epb C:1130-1422,C:1476-1567 [201937]
   Other proteins in same PDB: d4epba_, d4epbb_, d4epbc1
   automated match to d1ef2a2
   complexed with ni

Details for d4epbc2

PDB Entry: 4epb, 1.75 Å

PDB Description: Final Urease Structure for Radiation Damage Experiment at 100 K

PDB Compounds: (C:) urease subunit alpha

SCOPe Domain Sequences for d4epbc2:

Sequence; same for both SEQRES and ATOM records:

>d4epbc2 c.1.9.2 (C:1130-1422,C:1476-1567) alpha-subunit of urease, catalytic domain {Enterobacter aerogenes [TaxId: 548]}
gidthihwicpqqaeealvsgvttmvgggtgpaagthattctpgpwyisrmlqaadslpv
nigllgkgnvsqpdalreqvaagviglkihedwgatpaaidcaltvademdiqvalhsdt
lnesgfvedtlaaiggrtihtfhtegaggghapdiitacahpnilpsstnptlpytlnti
dehldmlmvchhldpdiaedvafaesrirretiaaedvlhdlgafsltssdsqamgrvge
vilrtwqvahrmkvqrgalaeetgdndnfrvkryiakytinpalthgiahevgXmfgalg
sarhhcrltflsqaaaangvaerlnlrsaiavvkgcrtvqkadmvhnslqpnitvdaqty
evrvdgelitsepadvlpmaqryflf

Timeline for d4epbc2:

• d4epbc2 first appeared in SCOPe 2.03
  
• d4epbc2 appears in SCOPe 2.04
  
• d4epbc2 appears in SCOPe 2.06
  
• d4epbc2 appears in the current release, SCOPe 2.08