Lineage for d2h1pl1 (2h1p L:1-113)

  1. Root: SCOP 1.69
  2. 450777Class b: All beta proteins [48724] (144 folds)
  3. 450778Fold b.1: Immunoglobulin-like beta-sandwich [48725] (23 superfamilies)
    sandwich; 7 strands in 2 sheets; greek-key
    some members of the fold have additional strands
  4. 450779Superfamily b.1.1: Immunoglobulin [48726] (4 families) (S)
  5. 450780Family b.1.1.1: V set domains (antibody variable domain-like) [48727] (27 proteins)
  6. 451612Protein Immunoglobulin light chain kappa variable domain, VL-kappa [88519] (14 species)
    VL-kappa domains of human and mouse antibodies are clustered by the sequence similarity within the germline encoded segment and then by the size of the complementarity determining regions CDR1 and CDR2, so the clusters may correspond to putative germline families in the species genomes; VL-kappa domains with artificial or grafted exogenous CDRs are listed as engineered species
  7. 451743Species Mouse (Mus musculus), cluster 1.1 [TaxId:10090] [88524] (126 PDB entries)
  8. 451829Domain d2h1pl1: 2h1p L:1-113 [20190]
    Other proteins in same PDB: d2h1ph1, d2h1ph2, d2h1pl2
    part of polysaccharide binding antibody 2H1

Details for d2h1pl1

PDB Entry: 2h1p (more details), 2.4 Å

PDB Description: the three-dimensional structures of a polysaccharide binding antibody to cryptococcus neoformans and its complex with a peptide from a phage display library: implications for the identification of peptide mimotopes

SCOP Domain Sequences for d2h1pl1:

Sequence; same for both SEQRES and ATOM records: (download)

>d2h1pl1 b.1.1.1 (L:1-113) Immunoglobulin light chain kappa variable domain, VL-kappa {Mouse (Mus musculus), cluster 1.1}
dvvmtqtplslpvslgdpasiscrssqslvhsngntylhwylqkpgqspklliykvsnrf
sgvpdkfsgsgsgtdftlkisrveaedqgvyfcsqsthvpwtfgggtkleikr

SCOP Domain Coordinates for d2h1pl1:

Click to download the PDB-style file with coordinates for d2h1pl1.
(The format of our PDB-style files is described here.)

Timeline for d2h1pl1:

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Domains from same chain:
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d2h1pl2