SCOP 1.65: Domain d1yeeh1: 1yee H:1-113

Lineage for d1yeeh1 (1yee H:1-113)

1. Root: SCOP 1.65

2. Class b: All beta proteins [48724] (126 folds)

3. Fold b.1: Immunoglobulin-like beta-sandwich [48725] (20 superfamilies)
   sandwich; 7 strands in 2 sheets; greek-key
   some members of the fold have additional strands

4. Superfamily b.1.1: Immunoglobulin [48726] (4 families)

5. Family b.1.1.1: V set domains (antibody variable domain-like) [48727] (21 proteins)

6. Protein Immunoglobulin heavy chain variable domain, VH [88543] (19 species)
   VH domains of human and mouse antibodies are clustered by the sequence similarity within the germline encoded segment and then by the size of the complementarity determining regions CDR1 and CDR2, so the clusters may correspond to putative germline families in the species genomes; VH domains with artificial or grafted exogeneous CDRs are listed as engineered species

7. Species Mouse (Mus musculus), cluster 3.2 [TaxId:10090] [88552] (118 PDB entries)

8. Domain d1yeeh1: 1yee H:1-113 [20157]
   Other proteins in same PDB: d1yeeh2, d1yeel1, d1yeel2
   part of Fab D2.5
   complexed with pnb

Details for d1yeeh1

PDB Entry: 1yee, 2.2 Å

PDB Description: structure of a catalytic antibody, igg2a fab fragment (d2.5)

SCOP Domain Sequences for d1yeeh1:

Sequence; same for both SEQRES and ATOM records:

>d1yeeh1 b.1.1.1 (H:1-113) Immunoglobulin heavy chain variable domain, VH {Mouse (Mus musculus), cluster 3.2}
evklqesgaelvrpgasvklscktsgyiftsywihwvkqraaaglewiariypgtgssyy
nvkfkgkatltadkssstaymqlsslksddsavyfcvrwgfipvredyvldywgqgtlvt
vss

Timeline for d1yeeh1:

• d1yeeh1 first appeared (with stable ids) in SCOP 1.55
  
• d1yeeh1 appears in SCOP 1.63
  
• d1yeeh1 appears in SCOP 1.67
  
• d1yeeh1 appears in the current release, SCOPe 2.08