SCOP 1.63: Domain d1yeda1: 1yed A:1-107

Lineage for d1yeda1 (1yed A:1-107)

1. Root: SCOP 1.63

2. Class b: All beta proteins [48724] (119 folds)

3. Fold b.1: Immunoglobulin-like beta-sandwich [48725] (20 superfamilies)
   sandwich; 7 strands in 2 sheets; greek-key
   some members of the fold have additional strands

4. Superfamily b.1.1: Immunoglobulin [48726] (4 families)

5. Family b.1.1.1: V set domains (antibody variable domain-like) [48727] (15 proteins)

6. Protein Immunoglobulin (variable domains of L and H chains) [48749] (228 species)

7. Species Fab D2.4 (mouse), kappa L chain [48830] (1 PDB entry)

8. Domain d1yeda1: 1yed A:1-107 [20150]
   Other proteins in same PDB: d1yeda2, d1yedb2, d1yedh2, d1yedl2

Details for d1yeda1

PDB Entry: 1yed, 3.1 Å

PDB Description: structure of a catalytic antibody igg2a fab fragment (d2.4)

SCOP Domain Sequences for d1yeda1:

Sequence; same for both SEQRES and ATOM records:

>d1yeda1 b.1.1.1 (A:1-107) Immunoglobulin (variable domains of L and H chains) {Fab D2.4 (mouse), kappa L chain}
divmtqspltlsvtigqpasisckssqsllysngktylnwllqrpgqspkrliylvskle
sgvpdrftgsgsgtdftlkisrveaadlgvyycvqgthfpytfgggtkleil

Timeline for d1yeda1:

• d1yeda1 first appeared (with stable ids) in SCOP 1.55
  
• d1yeda1 appears in SCOP 1.61
  
• d1yeda1 appears in SCOP 1.65
  
• d1yeda1 appears in the current release, SCOPe 2.08