Class b: All beta proteins [48724] (180 folds) |
Fold b.1: Immunoglobulin-like beta-sandwich [48725] (33 superfamilies) sandwich; 7 strands in 2 sheets; greek-key some members of the fold have additional strands |
Superfamily b.1.1: Immunoglobulin [48726] (5 families) |
Family b.1.1.1: V set domains (antibody variable domain-like) [48727] (33 proteins) |
Protein Immunoglobulin light chain kappa variable domain, VL-kappa [88519] (16 species) VL-kappa domains of human and mouse antibodies are clustered by the sequence similarity within the germline encoded segment and then by the size of the complementarity determining regions CDR1 and CDR2, so the clusters may correspond to putative germline families in the species genomes; VL-kappa domains with artificial or grafted exogenous CDRs are listed as engineered species |
Species Mouse (Mus musculus), cluster 2 [TaxId:10090] [88526] (28 PDB entries) |
Domain d1afvm1: 1afv M:1-112 [20132] Other proteins in same PDB: d1afva_, d1afvb_, d1afvh1, d1afvh2, d1afvk1, d1afvk2, d1afvl2, d1afvm2 part of Fab 25.3 against HIV-1 capsid protein (p24) complexed with pb |
PDB Entry: 1afv (more details), 3.7 Å
SCOPe Domain Sequences for d1afvm1:
Sequence; same for both SEQRES and ATOM records: (download)
>d1afvm1 b.1.1.1 (M:1-112) Immunoglobulin light chain kappa variable domain, VL-kappa {Mouse (Mus musculus), cluster 2 [TaxId: 10090]} divltqspaslavslgqratiscrasesvdnygisfmnwfqqkpgqppklliyaasnlgs gvparfsgsgsgtdfslnihpmeeedtamyfcqqskevpltfgagtkvelkr
Timeline for d1afvm1: