SCOP 1.63: Domain d1nldl1: 1nld L:1-107

Lineage for d1nldl1 (1nld L:1-107)

1. Root: SCOP 1.63

2. Class b: All beta proteins [48724] (119 folds)

3. Fold b.1: Immunoglobulin-like beta-sandwich [48725] (20 superfamilies)
   sandwich; 7 strands in 2 sheets; greek-key
   some members of the fold have additional strands

4. Superfamily b.1.1: Immunoglobulin [48726] (4 families)

5. Family b.1.1.1: V set domains (antibody variable domain-like) [48727] (15 proteins)

6. Protein Immunoglobulin (variable domains of L and H chains) [48749] (228 species)

7. Species Fab 1583, against an epitope of gp41 of HIV-1, (mouse), kappa L chain [48818] (1 PDB entry)

8. Domain d1nldl1: 1nld L:1-107 [20110]
   Other proteins in same PDB: d1nldh2, d1nldl2

Details for d1nldl1

PDB Entry: 1nld, 2.9 Å

PDB Description: fab fragment of a neutralizing antibody directed against an epitope of gp41 from hiv-1

SCOP Domain Sequences for d1nldl1:

Sequence; same for both SEQRES and ATOM records:

>d1nldl1 b.1.1.1 (L:1-107) Immunoglobulin (variable domains of L and H chains) {Fab 1583, against an epitope of gp41 of HIV-1, (mouse), kappa L chain}
dvvmtqtpltlsvtigqpasisckssqslldsdgktylnwllqrpgqspkrliylvskld
sgvpdrftgsgsgtdftlkisrveaedlgvyycwqgthfprtfgggtkleik

Timeline for d1nldl1:

• d1nldl1 first appeared (with stable ids) in SCOP 1.55
  
• d1nldl1 appears in SCOP 1.61
  
• d1nldl1 appears in SCOP 1.65
  
• d1nldl1 appears in the current release, SCOPe 2.08