Lineage for d1ghfh1 (1ghf H:1-115)

  1. Root: SCOP 1.69
  2. 450777Class b: All beta proteins [48724] (144 folds)
  3. 450778Fold b.1: Immunoglobulin-like beta-sandwich [48725] (23 superfamilies)
    sandwich; 7 strands in 2 sheets; greek-key
    some members of the fold have additional strands
  4. 450779Superfamily b.1.1: Immunoglobulin [48726] (4 families) (S)
  5. 450780Family b.1.1.1: V set domains (antibody variable domain-like) [48727] (27 proteins)
  6. 450916Protein Immunoglobulin heavy chain variable domain, VH [88543] (20 species)
    VH domains of human and mouse antibodies are clustered by the sequence similarity within the germline encoded segment and then by the size of the complementarity determining regions CDR1 and CDR2, so the clusters may correspond to putative germline families in the species genomes; VH domains with artificial or grafted exogenous CDRs are listed as engineered species
  7. 451404Species Mouse (Mus musculus), cluster 4 [TaxId:10090] [88554] (32 PDB entries)
  8. 451432Domain d1ghfh1: 1ghf H:1-115 [20109]
    Other proteins in same PDB: d1ghfh2, d1ghfl1, d1ghfl2
    part of Fab GH1002

Details for d1ghfh1

PDB Entry: 1ghf (more details), 2.7 Å

PDB Description: anti-anti-idiotype gh1002 fab fragment

SCOP Domain Sequences for d1ghfh1:

Sequence; same for both SEQRES and ATOM records: (download)

>d1ghfh1 b.1.1.1 (H:1-115) Immunoglobulin heavy chain variable domain, VH {Mouse (Mus musculus), cluster 4}
vqlqqsgpelkkpgetvkiscklwytftdygmnwvkqapgkglkwmgwiqtnteeptyga
efkgrfafsletsaftaykqinnlknedmatyfcarveagfdywaqgttltvss

SCOP Domain Coordinates for d1ghfh1:

Click to download the PDB-style file with coordinates for d1ghfh1.
(The format of our PDB-style files is described here.)

Timeline for d1ghfh1:

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Domains from same chain:
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d1ghfh2