Lineage for d1ghfl1 (1ghf L:1-107)

  1. Root: SCOP 1.73
  2. 651986Class b: All beta proteins [48724] (165 folds)
  3. 651987Fold b.1: Immunoglobulin-like beta-sandwich [48725] (27 superfamilies)
    sandwich; 7 strands in 2 sheets; greek-key
    some members of the fold have additional strands
  4. 651988Superfamily b.1.1: Immunoglobulin [48726] (4 families) (S)
  5. 651989Family b.1.1.1: V set domains (antibody variable domain-like) [48727] (29 proteins)
  6. 652980Protein Immunoglobulin light chain kappa variable domain, VL-kappa [88519] (14 species)
    VL-kappa domains of human and mouse antibodies are clustered by the sequence similarity within the germline encoded segment and then by the size of the complementarity determining regions CDR1 and CDR2, so the clusters may correspond to putative germline families in the species genomes; VL-kappa domains with artificial or grafted exogenous CDRs are listed as engineered species
  7. 653521Species Mouse (Mus musculus), cluster 4 [TaxId:10090] [88531] (181 PDB entries)
  8. 653679Domain d1ghfl1: 1ghf L:1-107 [20108]
    Other proteins in same PDB: d1ghfh1, d1ghfh2, d1ghfl2
    part of Fab GH1002

Details for d1ghfl1

PDB Entry: 1ghf (more details), 2.7 Å

PDB Description: anti-anti-idiotype gh1002 fab fragment
PDB Compounds: (L:) anti-anti-idiotype gh1002 fab fragment

SCOP Domain Sequences for d1ghfl1:

Sequence; same for both SEQRES and ATOM records: (download)

>d1ghfl1 b.1.1.1 (L:1-107) Immunoglobulin light chain kappa variable domain, VL-kappa {Mouse (Mus musculus), cluster 4 [TaxId: 10090]}
diqmtqttsslsaslgdrvtiscresqdisnslnwyqqkpdgtvklliyytsrlhsgvps
rfsgsgtgtdysltisnleqedfatyfcqqgntlpytfgggtkleik

SCOP Domain Coordinates for d1ghfl1:

Click to download the PDB-style file with coordinates for d1ghfl1.
(The format of our PDB-style files is described here.)

Timeline for d1ghfl1:

View in 3D
Domains from same chain:
(mouse over for more information)
d1ghfl2