Lineage for d1ucbl1 (1ucb L:4-108)

  1. Root: SCOP 1.71
  2. 546417Class b: All beta proteins [48724] (149 folds)
  3. 546418Fold b.1: Immunoglobulin-like beta-sandwich [48725] (25 superfamilies)
    sandwich; 7 strands in 2 sheets; greek-key
    some members of the fold have additional strands
  4. 546419Superfamily b.1.1: Immunoglobulin [48726] (4 families) (S)
  5. 546420Family b.1.1.1: V set domains (antibody variable domain-like) [48727] (28 proteins)
  6. 547289Protein Immunoglobulin light chain kappa variable domain, VL-kappa [88519] (14 species)
    VL-kappa domains of human and mouse antibodies are clustered by the sequence similarity within the germline encoded segment and then by the size of the complementarity determining regions CDR1 and CDR2, so the clusters may correspond to putative germline families in the species genomes; VL-kappa domains with artificial or grafted exogenous CDRs are listed as engineered species
  7. 547441Species Mouse (Mus musculus), cluster 1.1 [TaxId:10090] [88524] (126 PDB entries)
  8. 547533Domain d1ucbl1: 1ucb L:4-108 [20100]
    Other proteins in same PDB: d1ucbh1, d1ucbh2, d1ucbl2
    part of humanized Fab CBR96
    complexed with so4

Details for d1ucbl1

PDB Entry: 1ucb (more details), 2.5 Å

PDB Description: structure of uncomplexed fab compared to complex (1cly, 1clz)

SCOP Domain Sequences for d1ucbl1:

Sequence; same for both SEQRES and ATOM records: (download)

>d1ucbl1 b.1.1.1 (L:4-108) Immunoglobulin light chain kappa variable domain, VL-kappa {Mouse (Mus musculus), cluster 1.1}
mtqipvslpvslgdqasiscrssqiivhnngntylewylqkpgqspqlliykvsnrfsgv
pdrfsgsgsgtdftlkisrveaedlgvyycfqgshvpftfgsgtkleikr

SCOP Domain Coordinates for d1ucbl1:

Click to download the PDB-style file with coordinates for d1ucbl1.
(The format of our PDB-style files is described here.)

Timeline for d1ucbl1:

View in 3D
Domains from same chain:
(mouse over for more information)
d1ucbl2