Lineage for d1opgh1 (1opg H:1-125)

  1. Root: SCOP 1.73
  2. 651986Class b: All beta proteins [48724] (165 folds)
  3. 651987Fold b.1: Immunoglobulin-like beta-sandwich [48725] (27 superfamilies)
    sandwich; 7 strands in 2 sheets; greek-key
    some members of the fold have additional strands
  4. 651988Superfamily b.1.1: Immunoglobulin [48726] (4 families) (S)
  5. 651989Family b.1.1.1: V set domains (antibody variable domain-like) [48727] (29 proteins)
  6. 652160Protein Immunoglobulin heavy chain variable domain, VH [88543] (20 species)
    VH domains of human and mouse antibodies are clustered by the sequence similarity within the germline encoded segment and then by the size of the complementarity determining regions CDR1 and CDR2, so the clusters may correspond to putative germline families in the species genomes; VH domains with artificial or grafted exogenous CDRs are listed as engineered species
  7. 652445Species Mouse (Mus musculus), cluster 2.2 [TaxId:10090] [88550] (51 PDB entries)
  8. 652457Domain d1opgh1: 1opg H:1-125 [20069]
    Other proteins in same PDB: d1opgh2, d1opgl1, d1opgl2
    part of anti-integrin Fab OPG2

Details for d1opgh1

PDB Entry: 1opg (more details), 2 Å

PDB Description: opg2 fab fragment
PDB Compounds: (H:) opg2 fab (heavy chain)

SCOP Domain Sequences for d1opgh1:

Sequence; same for both SEQRES and ATOM records: (download)

>d1opgh1 b.1.1.1 (H:1-125) Immunoglobulin heavy chain variable domain, VH {Mouse (Mus musculus), cluster 2.2 [TaxId: 10090]}

SCOP Domain Coordinates for d1opgh1:

Click to download the PDB-style file with coordinates for d1opgh1.
(The format of our PDB-style files is described here.)

Timeline for d1opgh1:

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