SCOP 1.73: Domain d1bm3l1: 1bm3 L:1-107

Lineage for d1bm3l1 (1bm3 L:1-107)

1. Root: SCOP 1.73

2. Class b: All beta proteins [48724] (165 folds)

3. Fold b.1: Immunoglobulin-like beta-sandwich [48725] (27 superfamilies)
   sandwich; 7 strands in 2 sheets; greek-key
   some members of the fold have additional strands

4. Superfamily b.1.1: Immunoglobulin [48726] (4 families)

5. Family b.1.1.1: V set domains (antibody variable domain-like) [48727] (29 proteins)

6. Protein Immunoglobulin light chain kappa variable domain, VL-kappa [88519] (14 species)
   VL-kappa domains of human and mouse antibodies are clustered by the sequence similarity within the germline encoded segment and then by the size of the complementarity determining regions CDR1 and CDR2, so the clusters may correspond to putative germline families in the species genomes; VL-kappa domains with artificial or grafted exogenous CDRs are listed as engineered species

7. Species Mouse (Mus musculus), cluster 4 [TaxId:10090] [88531] (181 PDB entries)

8. Domain d1bm3l1: 1bm3 L:1-107 [20066]
   Other proteins in same PDB: d1bm3h1, d1bm3h2, d1bm3l2
   part of anti-integrin Fab OPG2

Details for d1bm3l1

PDB Entry: 1bm3, 2 Å

PDB Description: immunoglobulin opg2 fab-peptide complex

PDB Compounds: (L:) immunoglobulin opg2 fab, constant domain

SCOP Domain Sequences for d1bm3l1:

Sequence; same for both SEQRES and ATOM records:

>d1bm3l1 b.1.1.1 (L:1-107) Immunoglobulin light chain kappa variable domain, VL-kappa {Mouse (Mus musculus), cluster 4 [TaxId: 10090]}
delltqspatlsvtpgdsvslscrasqsisnnlhwyqqkshesprllikyasqsisgips
rfsgsgsgtdftlsinsvetedfgmyfcqqsnswpltfgggskleik

Timeline for d1bm3l1:

• d1bm3l1 first appeared (with stable ids) in SCOP 1.55
  
• d1bm3l1 appears in SCOP 1.71
  
• d1bm3l1 appears in SCOP 1.75
  
• d1bm3l1 appears in the current release, SCOPe 2.08