SCOPe 2.08: Domain d3ruld1: 3rul D:1-75

Lineage for d3ruld1 (3rul D:1-75)

1. Root: SCOPe 2.08

2. Class d: Alpha and beta proteins (a+b) [53931] (396 folds)

3. Fold d.15: beta-Grasp (ubiquitin-like) [54235] (15 superfamilies)
   core: beta(2)-alpha-beta(2); mixed beta-sheet 2143

4. Superfamily d.15.1: Ubiquitin-like [54236] (11 families)

5. Family d.15.1.1: Ubiquitin-related [54237] (39 proteins)
   Pfam PF00240

6. Protein Ubiquitin [54238] (9 species)

7. Species Human (Homo sapiens) [TaxId:9606] [54239] (312 PDB entries)
   Uniprot P62988
   identical sequence in many other species

8. Domain d3ruld1: 3rul D:1-75 [200535]
   Other proteins in same PDB: d3rula2, d3rulb2, d3rulc2, d3ruld2
   automated match to d3rulc_
   complexed with cl, m12, man, n1l, tla

Details for d3ruld1

PDB Entry: 3rul, 2.5 Å

PDB Description: new strategy to analyze structures of glycopeptide-target complexes

PDB Compounds: (D:) Ubiquitin

SCOPe Domain Sequences for d3ruld1:

Sequence; same for both SEQRES and ATOM records:

>d3ruld1 d.15.1.1 (D:1-75) Ubiquitin {Human (Homo sapiens) [TaxId: 9606]}
mqifvktltgktitlevepsdtienvkakiqdkegippdqqrlifagkqledgrtlsdyn
iqkestlhlvlrlrg

Timeline for d3ruld1:

• d3ruld1 first appeared in SCOPe 2.03, called d3ruld_
  
• d3ruld1 was called d3ruld_ in SCOPe 2.07