Lineage for d1nqbc2 (1nqb C:121-233)

  1. Root: SCOP 1.69
  2. 450777Class b: All beta proteins [48724] (144 folds)
  3. 450778Fold b.1: Immunoglobulin-like beta-sandwich [48725] (23 superfamilies)
    sandwich; 7 strands in 2 sheets; greek-key
    some members of the fold have additional strands
  4. 450779Superfamily b.1.1: Immunoglobulin [48726] (4 families) (S)
  5. 450780Family b.1.1.1: V set domains (antibody variable domain-like) [48727] (27 proteins)
  6. 451612Protein Immunoglobulin light chain kappa variable domain, VL-kappa [88519] (14 species)
    VL-kappa domains of human and mouse antibodies are clustered by the sequence similarity within the germline encoded segment and then by the size of the complementarity determining regions CDR1 and CDR2, so the clusters may correspond to putative germline families in the species genomes; VL-kappa domains with artificial or grafted exogenous CDRs are listed as engineered species
  7. 451743Species Mouse (Mus musculus), cluster 1.1 [TaxId:10090] [88524] (126 PDB entries)
  8. 451767Domain d1nqbc2: 1nqb C:121-233 [20045]
    Other proteins in same PDB: d1nqba1, d1nqbc1
    part of scFv trivalent antibody; N-terminal, VH domain is from B1-8 antibody (1A6U CH H); C-terminal, VL domain is from NQ11 antibody

Details for d1nqbc2

PDB Entry: 1nqb (more details), 2 Å

PDB Description: trivalent antibody fragment

SCOP Domain Sequences for d1nqbc2:

Sequence; same for both SEQRES and ATOM records: (download)

>d1nqbc2 b.1.1.1 (C:121-233) Immunoglobulin light chain kappa variable domain, VL-kappa {Mouse (Mus musculus), cluster 1.1}

SCOP Domain Coordinates for d1nqbc2:

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Timeline for d1nqbc2:

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