Lineage for d1rmfh1 (1rmf H:1-119)

  1. Root: SCOP 1.69
  2. 450777Class b: All beta proteins [48724] (144 folds)
  3. 450778Fold b.1: Immunoglobulin-like beta-sandwich [48725] (23 superfamilies)
    sandwich; 7 strands in 2 sheets; greek-key
    some members of the fold have additional strands
  4. 450779Superfamily b.1.1: Immunoglobulin [48726] (4 families) (S)
  5. 450780Family b.1.1.1: V set domains (antibody variable domain-like) [48727] (27 proteins)
  6. 450916Protein Immunoglobulin heavy chain variable domain, VH [88543] (20 species)
    VH domains of human and mouse antibodies are clustered by the sequence similarity within the germline encoded segment and then by the size of the complementarity determining regions CDR1 and CDR2, so the clusters may correspond to putative germline families in the species genomes; VH domains with artificial or grafted exogenous CDRs are listed as engineered species
  7. 451214Species Mouse (Mus musculus), cluster 3.2 [TaxId:10090] [88552] (143 PDB entries)
  8. 451333Domain d1rmfh1: 1rmf H:1-119 [20029]
    Other proteins in same PDB: d1rmfh2, d1rmfl1, d1rmfl2
    part of Fab R6.5

Details for d1rmfh1

PDB Entry: 1rmf (more details), 2.8 Å

PDB Description: structures of a monoclonal anti-icam-1 antibody r6.5 fragment at 2.8 angstroms resolution

SCOP Domain Sequences for d1rmfh1:

Sequence; same for both SEQRES and ATOM records: (download)

>d1rmfh1 b.1.1.1 (H:1-119) Immunoglobulin heavy chain variable domain, VH {Mouse (Mus musculus), cluster 3.2}
qvqlqqsgpelvrpgvsvkisckgsgytfidyaihwvkeshakslewigvisaysgdtny
nqkfkgkatmtvdkssntaylelarltsedsaiyycarggwlllsfdywgqgttltvss

SCOP Domain Coordinates for d1rmfh1:

Click to download the PDB-style file with coordinates for d1rmfh1.
(The format of our PDB-style files is described here.)

Timeline for d1rmfh1:

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Domains from same chain:
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d1rmfh2