Lineage for d1rmfl1 (1rmf L:1-112)

  1. Root: SCOP 1.69
  2. 450777Class b: All beta proteins [48724] (144 folds)
  3. 450778Fold b.1: Immunoglobulin-like beta-sandwich [48725] (23 superfamilies)
    sandwich; 7 strands in 2 sheets; greek-key
    some members of the fold have additional strands
  4. 450779Superfamily b.1.1: Immunoglobulin [48726] (4 families) (S)
  5. 450780Family b.1.1.1: V set domains (antibody variable domain-like) [48727] (27 proteins)
  6. 451612Protein Immunoglobulin light chain kappa variable domain, VL-kappa [88519] (14 species)
    VL-kappa domains of human and mouse antibodies are clustered by the sequence similarity within the germline encoded segment and then by the size of the complementarity determining regions CDR1 and CDR2, so the clusters may correspond to putative germline families in the species genomes; VL-kappa domains with artificial or grafted exogenous CDRs are listed as engineered species
  7. 451743Species Mouse (Mus musculus), cluster 1.1 [TaxId:10090] [88524] (126 PDB entries)
  8. 451858Domain d1rmfl1: 1rmf L:1-112 [20028]
    Other proteins in same PDB: d1rmfh1, d1rmfh2, d1rmfl2
    part of Fab R6.5

Details for d1rmfl1

PDB Entry: 1rmf (more details), 2.8 Å

PDB Description: structures of a monoclonal anti-icam-1 antibody r6.5 fragment at 2.8 angstroms resolution

SCOP Domain Sequences for d1rmfl1:

Sequence; same for both SEQRES and ATOM records: (download)

>d1rmfl1 b.1.1.1 (L:1-112) Immunoglobulin light chain kappa variable domain, VL-kappa {Mouse (Mus musculus), cluster 1.1}
dvvmtqsplslpvslgdqasiscrssqslvhsngnnylhwylqksgqapklliykvsnrf
sgvpdrfsgsgsgtdftlkisrveaedlgvyfcsqsthvpltfgggtkleik

SCOP Domain Coordinates for d1rmfl1:

Click to download the PDB-style file with coordinates for d1rmfl1.
(The format of our PDB-style files is described here.)

Timeline for d1rmfl1:

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Domains from same chain:
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d1rmfl2