SCOPe 2.05: Domain d3mkaj_: 3mka J:

Lineage for d3mkaj_ (3mka J:)

1. Root: SCOPe 2.05

2. Class d: Alpha and beta proteins (a+b) [53931] (381 folds)

3. Fold d.153: Ntn hydrolase-like [56234] (2 superfamilies)
   4 layers: alpha/beta/beta/alpha; has an unusual sheet-to-sheet packing

4. Superfamily d.153.1: N-terminal nucleophile aminohydrolases (Ntn hydrolases) [56235] (8 families)
   N-terminal residue provides two catalytic groups, nucleophile and proton donor

5. Family d.153.1.4: Proteasome subunits [56251] (4 proteins)

6. Protein automated matches [190144] (7 species)
   not a true protein

7. Species Mycobacterium tuberculosis [TaxId:1773] [187707] (9 PDB entries)

8. Domain d3mkaj_: 3mka J: [199860]
   automated match to d1q5rh_
   mutant

Details for d3mkaj_

PDB Entry: 3mka, 2.51 Å

PDB Description: crystal structure of mycobacterium tuberculosis proteasome with propetide and an t1a mutation at beta-subunit

PDB Compounds: (J:) Proteasome subunit beta

SCOPe Domain Sequences for d3mkaj_:

Sequence, based on SEQRES records:

>d3mkaj_ d.153.1.4 (J:) automated matches {Mycobacterium tuberculosis [TaxId: 1773]}
avdlssftdflrrqapellpasisggaplaggdaqlphgativalkypggvvmagdrrst
qgnmisgrdvrkvyitddytatgiagtaavavefarlyavelehyeklegvpltfagkin
rlaimvrgnlaaamqgllalpllagydihasdpqsagrivsfdaaggwnieeegyqavgs
gslfakssmkklysqvtdgdsglrvavealydaadddsatggpdlvrgifptaviidadg
avdvpesriaelaraiiesrs

Sequence, based on observed residues (ATOM records):

>d3mkaj_ d.153.1.4 (J:) automated matches {Mycobacterium tuberculosis [TaxId: 1773]}
avdlssftdflrrqapellpasisgqlphgativalkypggvvmagdrrstqgnmisgrd
vrkvyitddytatgiagtaavavefarlyavelehyeklegvpltfagkinrlaimvrgn
laaamqgllalpllagydihasdpqsagrivsfdaaggwnieeegyqavgsgslfakssm
kklysqvtdgdsglrvavealydaadddsatggpdlvrgifptaviidadgavdvpesri
aelaraiiesrs

Timeline for d3mkaj_:

• d3mkaj_ first appeared in SCOPe 2.03
  
• d3mkaj_ appears in SCOPe 2.04
  
• d3mkaj_ appears in SCOPe 2.06
  
• d3mkaj_ appears in the current release, SCOPe 2.08