SCOPe 2.03: Domain d3lvsb_: 3lvs B:

Lineage for d3lvsb_ (3lvs B:)

1. Root: SCOPe 2.03

2. Class a: All alpha proteins [46456] (284 folds)

3. Fold a.128: Terpenoid synthases [48575] (1 superfamily)
   multihelical; core: 8 helices (C-J) are arranged in 2 parallel layers

4. Superfamily a.128.1: Terpenoid synthases [48576] (6 families)
   duplication: two metal-binding sites are related by a pseudo dyad that also relates helices C-F to helices G-J

5. Family a.128.1.0: automated matches [196408] (1 protein)
   not a true family

6. Protein automated matches [196409] (21 species)
   not a true protein

7. Species Rhodobacter capsulatus [TaxId:1061] [196462] (2 PDB entries)

8. Domain d3lvsb_: 3lvs B: [199764]
   automated match to d3lvsa_
   complexed with gol, po4

Details for d3lvsb_

PDB Entry: 3lvs, 2.15 Å

PDB Description: crystal structure of farnesyl diphosphate synthase from rhodobacter capsulatus sb1003

PDB Compounds: (B:) Farnesyl Diphosphate Synthase

SCOPe Domain Sequences for d3lvsb_:

Sequence, based on SEQRES records:

>d3lvsb_ a.128.1.0 (B:) automated matches {Rhodobacter capsulatus [TaxId: 1061]}
slfserlkeiqdavetamaaaigrlpagdlrdamayaaqggkrlraflaiesaaihgism
aqampaalavealhayslvhddmpcmdnddlrrglptvhkkwddatavlagdalqtlafe
lctdpvlgsaenrvalvaalaqasgaegmvygqaldiaaetaavpltldeiirlqagktg
alisfaaqagailagadrgpltayatalglafqiaddildvegneeaagkrlgkdaeahk
atfvsllglagaksraadlvaeaeaalapygeaastlracaryvie

Sequence, based on observed residues (ATOM records):

>d3lvsb_ a.128.1.0 (B:) automated matches {Rhodobacter capsulatus [TaxId: 1061]}
slfserlkeiqdavetamaaaigrlpagdlrdamayaaqggkrlraflaiesaaihgism
aqampaalavealhayslvhddmpcmdnddlrrglptvhkkwddatavlagdalqtlafe
lctdpvlgsaenrvalvaalaqasgaegmvygqaldiaaetaavpltldeiirlqagktg
alisfaaqagailagadrgpltayatalglafqiaddildvedaeahkatfvsllglaga
ksraadlvaeaeaalapygeaastlracaryvie

Timeline for d3lvsb_:

• d3lvsb_ is new in SCOPe 2.03-stable
  
• d3lvsb_ appears in SCOPe 2.04
  
• d3lvsb_ appears in the current release, SCOPe 2.08