SCOPe 2.06: Domain d3knzd1: 3knz D:2-322

Lineage for d3knzd1 (3knz D:2-322)

1. Root: SCOPe 2.06

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.80: SIS domain [53696] (1 superfamily)
   3 layers: a/b/a; parallel beta-sheet of 5 strands, order 21345

4. Superfamily c.80.1: SIS domain [53697] (4 families)

5. Family c.80.1.0: automated matches [191405] (1 protein)
   not a true family

6. Protein automated matches [190547] (15 species)
   not a true protein

7. Species Salmonella enterica [TaxId:90371] [196499] (1 PDB entry)

8. Domain d3knzd1: 3knz D:2-322 [199629]
   Other proteins in same PDB: d3knza2, d3knzb2, d3knzc2, d3knzd2, d3knze2, d3knzf2
   automated match to d3knzf_
   complexed with etx, imd

Details for d3knzd1

PDB Entry: 3knz, 2.5 Å

PDB Description: crystal structure of putative sugar binding protein (np_459565.1) from salmonella typhimurium lt2 at 2.50 a resolution

PDB Compounds: (D:) Putative sugar binding protein

SCOPe Domain Sequences for d3knzd1:

Sequence, based on SEQRES records:

>d3knzd1 c.80.1.0 (D:2-322) automated matches {Salmonella enterica [TaxId: 90371]}
netplrllemltqtredlwraaqaltergvtriiltgsgtsyhgaltartfmqrwcalpv
dvcwpfmlddetlarsgkalvvgisqgggslstlaamerarnvghitasmagvapatidr
aadyiltvpcgeetagaktkgyhctvlnlmllalavagqqqrldgeqrrslllrmektfn
hlpalvtasqawaqtnalalrdsadirltgpatlfgtvqegalkmletlrcpvsgyefee
fihgiynafnaqsalimldpqpdarqdrlaqilgewtpsiyrigpqvennglnlnfpfvn
dedfavfeyiiplqmlcailp

Sequence, based on observed residues (ATOM records):

>d3knzd1 c.80.1.0 (D:2-322) automated matches {Salmonella enterica [TaxId: 90371]}
netplrllemltqtredlwraaqaltergvtriiltgsgtsyhgaltartfmqrwcalpv
dvcwpfmlddetlarsgkalvvgisqgggslstlaamerarnvghitasmagvapatidr
aadyiltvpcgetkgyhctvlnlmllalavagqqqrldgeqrrslllrmektfnhlpalv
tasqawaqtnalalrdsadirltgpatlfgtvqegalkmletlrcpvsgyefeefihgiy
nafnaqsalimldpqpdarqdrlaqilgewtpsiyrigpqvennglnlnfpfvndedfav
feyiiplqmlcailp

Timeline for d3knzd1:

• d3knzd1 first appeared in SCOPe 2.03, called d3knzd_
  
• d3knzd1 was called d3knzd_ in SCOPe 2.05
  
• d3knzd1 appears in SCOPe 2.07
  
• d3knzd1 appears in the current release, SCOPe 2.08