SCOPe 2.03: Domain d3knzd_: 3knz D:

Lineage for d3knzd_ (3knz D:)

1. Root: SCOPe 2.03

2. Class c: Alpha and beta proteins (a/b) [51349] (147 folds)

3. Fold c.80: SIS domain [53696] (1 superfamily)
   3 layers: a/b/a; parallel beta-sheet of 5 strands, order 21345

4. Superfamily c.80.1: SIS domain [53697] (4 families)

5. Family c.80.1.0: automated matches [191405] (1 protein)
   not a true family

6. Protein automated matches [190547] (13 species)
   not a true protein

7. Species Salmonella enterica [TaxId:90371] [196499] (1 PDB entry)

8. Domain d3knzd_: 3knz D: [199629]
   automated match to d3knzf_
   complexed with etx, imd

Details for d3knzd_

PDB Entry: 3knz, 2.5 Å

PDB Description: crystal structure of putative sugar binding protein (np_459565.1) from salmonella typhimurium lt2 at 2.50 a resolution

PDB Compounds: (D:) Putative sugar binding protein

SCOPe Domain Sequences for d3knzd_:

Sequence, based on SEQRES records:

>d3knzd_ c.80.1.0 (D:) automated matches {Salmonella enterica [TaxId: 90371]}
nlyfqgmnetplrllemltqtredlwraaqaltergvtriiltgsgtsyhgaltartfmq
rwcalpvdvcwpfmlddetlarsgkalvvgisqgggslstlaamerarnvghitasmagv
apatidraadyiltvpcgeetagaktkgyhctvlnlmllalavagqqqrldgeqrrslll
rmektfnhlpalvtasqawaqtnalalrdsadirltgpatlfgtvqegalkmletlrcpv
sgyefeefihgiynafnaqsalimldpqpdarqdrlaqilgewtpsiyrigpqvenngln
lnfpfvndedfavfeyiiplqmlcailp

Sequence, based on observed residues (ATOM records):

>d3knzd_ c.80.1.0 (D:) automated matches {Salmonella enterica [TaxId: 90371]}
nlyfqgmnetplrllemltqtredlwraaqaltergvtriiltgsgtsyhgaltartfmq
rwcalpvdvcwpfmlddetlarsgkalvvgisqgggslstlaamerarnvghitasmagv
apatidraadyiltvpcgetkgyhctvlnlmllalavagqqqrldgeqrrslllrmektf
nhlpalvtasqawaqtnalalrdsadirltgpatlfgtvqegalkmletlrcpvsgyefe
efihgiynafnaqsalimldpqpdarqdrlaqilgewtpsiyrigpqvennglnlnfpfv
ndedfavfeyiiplqmlcailp

Timeline for d3knzd_:

• d3knzd_ is new in SCOPe 2.03-stable
  
• d3knzd_ appears in SCOPe 2.04
  
• d3knzd_ appears in the current release, SCOPe 2.08, called d3knzd1