SCOP 1.71: Domain d1dvfb_: 1dvf B:

Lineage for d1dvfb_ (1dvf B:)

1. Root: SCOP 1.71

2. Class b: All beta proteins [48724] (149 folds)

3. Fold b.1: Immunoglobulin-like beta-sandwich [48725] (25 superfamilies)
   sandwich; 7 strands in 2 sheets; greek-key
   some members of the fold have additional strands

4. Superfamily b.1.1: Immunoglobulin [48726] (4 families)

5. Family b.1.1.1: V set domains (antibody variable domain-like) [48727] (28 proteins)

6. Protein Immunoglobulin heavy chain variable domain, VH [88543] (20 species)
   VH domains of human and mouse antibodies are clustered by the sequence similarity within the germline encoded segment and then by the size of the complementarity determining regions CDR1 and CDR2, so the clusters may correspond to putative germline families in the species genomes; VH domains with artificial or grafted exogenous CDRs are listed as engineered species

7. Species Mouse (Mus musculus), cluster 5 [TaxId:10090] [88555] (36 PDB entries)

8. Domain d1dvfb_: 1dvf B: [19953]
   Other proteins in same PDB: d1dvfa_, d1dvfc_
   part of Fv D1.3
   CASP1
   complexed with zn

Details for d1dvfb_

PDB Entry: 1dvf, 1.9 Å

PDB Description: idiotopic antibody d1.3 fv fragment-antiidiotopic antibody e5.2 fv fragment complex

SCOP Domain Sequences for d1dvfb_:

Sequence; same for both SEQRES and ATOM records:

>d1dvfb_ b.1.1.1 (B:) Immunoglobulin heavy chain variable domain, VH {Mouse (Mus musculus), cluster 5}
qvqlqesgpglvapsqslsitctvsgfsltgygvnwvrqppgkglewlgmiwgdgntdyn
salksrlsiskdnsksqvflkmnslhtddtaryycarerdyrldywgqgttltvss

Timeline for d1dvfb_:

• d1dvfb_ first appeared (with stable ids) in SCOP 1.55
  
• d1dvfb_ appears in SCOP 1.69
  
• d1dvfb_ appears in SCOP 1.73
  
• d1dvfb_ appears in the current release, SCOPe 2.08