Lineage for d3gbml1 (3gbm L:3-105)

  1. Root: SCOPe 2.04
  2. 1510239Class b: All beta proteins [48724] (176 folds)
  3. 1510240Fold b.1: Immunoglobulin-like beta-sandwich [48725] (31 superfamilies)
    sandwich; 7 strands in 2 sheets; greek-key
    some members of the fold have additional strands
  4. 1510241Superfamily b.1.1: Immunoglobulin [48726] (5 families) (S)
  5. 1519111Family b.1.1.0: automated matches [191470] (1 protein)
    not a true family
  6. 1519112Protein automated matches [190740] (19 species)
    not a true protein
  7. 1519212Species Human (Homo sapiens) [TaxId:9606] [187920] (522 PDB entries)
  8. 1519941Domain d3gbml1: 3gbm L:3-105 [199436]
    Other proteins in same PDB: d3gbma_, d3gbmb_, d3gbmc_, d3gbmd_, d3gbml2, d3gbmm2
    automated match to d1aqkl1
    complexed with bma, edo, gol, nag

Details for d3gbml1

PDB Entry: 3gbm (more details), 2.7 Å

PDB Description: Crystal Structure of Fab CR6261 in Complex with a H5N1 influenza virus hemagglutinin.
PDB Compounds: (L:) antibody (Fab)

SCOPe Domain Sequences for d3gbml1:

Sequence, based on SEQRES records: (download)

>d3gbml1 b.1.1.0 (L:3-105) automated matches {Human (Homo sapiens) [TaxId: 9606]}
vltqppsvsaapgqkvtiscsgsssnigndyvswyqqlpgtapklliydnnkrpsgipdr
fsgsksgtsatlgitglqtgdeanyycatwdrrptayvvfgggtklt

Sequence, based on observed residues (ATOM records): (download)

>d3gbml1 b.1.1.0 (L:3-105) automated matches {Human (Homo sapiens) [TaxId: 9606]}
vltqppsvsaapgqkvtiscsgsssnigndyvswyqqlpgtapklliydnnkrpsgipdr
fsgsksgtsatlgitglqtgdeanyycatwdrtayvvfgggtklt

SCOPe Domain Coordinates for d3gbml1:

Click to download the PDB-style file with coordinates for d3gbml1.
(The format of our PDB-style files is described here.)

Timeline for d3gbml1: