Lineage for d3g08a1 (3g08 A:7-185)

  1. Root: SCOPe 2.06
  2. 2152203Class d: Alpha and beta proteins (a+b) [53931] (385 folds)
  3. 2163004Fold d.19: MHC antigen-recognition domain [54451] (1 superfamily)
    dimeric
  4. 2163005Superfamily d.19.1: MHC antigen-recognition domain [54452] (2 families) (S)
  5. 2163984Family d.19.1.0: automated matches [227140] (1 protein)
    not a true family
  6. 2163985Protein automated matches [226842] (4 species)
    not a true protein
  7. 2164094Species Mouse (Mus musculus) [TaxId:10090] [224924] (33 PDB entries)
  8. 2164095Domain d3g08a1: 3g08 A:7-185 [199428]
    Other proteins in same PDB: d3g08a2, d3g08b_
    automated match to d1onqa2
    complexed with fee, nag, plm

Details for d3g08a1

PDB Entry: 3g08 (more details), 1.6 Å

PDB Description: Crystal structure of the alpha-galactosylceramide analog OCH in complex with mouse CD1d
PDB Compounds: (A:) T-cell surface glycoprotein CD1d1

SCOPe Domain Sequences for d3g08a1:

Sequence, based on SEQRES records: (download)

>d3g08a1 d.19.1.0 (A:7-185) automated matches {Mouse (Mus musculus) [TaxId: 10090]}
nytfrclqmssfanrswsrtdsvvwlgdlqthrwsndsatisftkpwsqgklsnqqwekl
qhmfqvyrvsftrdiqelvkmmspkedypieiqlsagcemypgnasesflhvafqgkyvv
rfwgtswqtvpgapswldlpikvlnadqgtsatvqmllndtcplfvrglleagksdlek

Sequence, based on observed residues (ATOM records): (download)

>d3g08a1 d.19.1.0 (A:7-185) automated matches {Mouse (Mus musculus) [TaxId: 10090]}
nytfrclqmssfanrswsrtdsvvwlgdlqthrwsndsatisftkpwsqgklsnqqwekl
qhmfqvyrvsftrdiqelvkmmedypieiqlsagcemyasesflhvafqgkyvvrfwgts
wqtvpgapswldlpikvlnadqgtsatvqmllndtcplfvrglleagksdlek

SCOPe Domain Coordinates for d3g08a1:

Click to download the PDB-style file with coordinates for d3g08a1.
(The format of our PDB-style files is described here.)

Timeline for d3g08a1:

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Domains from same chain:
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d3g08a2
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Domains from other chains:
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d3g08b_