SCOPe 2.08: Domain d3eybb_: 3eyb B:

Lineage for d3eybb_ (3eyb B:)

1. Root: SCOPe 2.08

2. Class a: All alpha proteins [46456] (290 folds)

3. Fold a.123: Nuclear receptor ligand-binding domain [48507] (1 superfamily)
   multihelical; 3 layers or orthogonally packed helices

4. Superfamily a.123.1: Nuclear receptor ligand-binding domain [48508] (2 families)

5. Family a.123.1.1: Nuclear receptor ligand-binding domain [48509] (34 proteins)

6. Protein automated matches [190059] (14 species)
   not a true protein

7. Species Branchiostoma floridae [TaxId:7739] [188654] (1 PDB entry)

8. Domain d3eybb_: 3eyb B: [199378]
   automated match to d3eybd_

Details for d3eybb_

PDB Entry: 3eyb, 2.79 Å

PDB Description: Structural and functional insights into the ligand binding domain of a non-duplicated RXR from the invertebrate chordate amphioxus

PDB Compounds: (B:) Nuclear hormone receptor RXR

SCOPe Domain Sequences for d3eybb_:

Sequence, based on SEQRES records:

>d3eybb_ a.123.1.1 (B:) automated matches {Branchiostoma floridae [TaxId: 7739]}
dmpvekiqeaemavepkdgnmveqpndpvtnicqaadkqlvtlvewakriphfsdlpidd
qvillragwnelliaafshrsidvkdgillasglhvhrssahqagvgtifdrvltelvak
mrdmkmdktelgclraivlfnpdakgltdpslveslrekvyasleeyckqqypeqpgrfa
klllrlpalrsiglkclehlfffkligdtpidtflmeml

Sequence, based on observed residues (ATOM records):

>d3eybb_ a.123.1.1 (B:) automated matches {Branchiostoma floridae [TaxId: 7739]}
dmpvekiqeaemavepdkqlvtlvewakriphfsdlpiddqvillragwnelliaafshr
sidvkdgillasglhvhrssahqagvgtifdrvltelvakmrdmkmdktelgclraivlf
npdakgltdpslveslrekvyasleeyckqqypeqpgrfaklllrlpalrsiglkclehl
fffkligdtpidtflmeml

Timeline for d3eybb_:

• d3eybb_ first appeared in SCOPe 2.03
  
• d3eybb_ appears in SCOPe 2.07