Lineage for d1vfab_ (1vfa B:)

  1. Root: SCOP 1.65
  2. 287094Class b: All beta proteins [48724] (126 folds)
  3. 287095Fold b.1: Immunoglobulin-like beta-sandwich [48725] (20 superfamilies)
    sandwich; 7 strands in 2 sheets; greek-key
    some members of the fold have additional strands
  4. 287096Superfamily b.1.1: Immunoglobulin [48726] (4 families) (S)
  5. 287097Family b.1.1.1: V set domains (antibody variable domain-like) [48727] (21 proteins)
  6. 287195Protein Immunoglobulin heavy chain variable domain, VH [88543] (19 species)
    VH domains of human and mouse antibodies are clustered by the sequence similarity within the germline encoded segment and then by the size of the complementarity determining regions CDR1 and CDR2, so the clusters may correspond to putative germline families in the species genomes; VH domains with artificial or grafted exogeneous CDRs are listed as engineered species
  7. 287615Species Mouse (Mus musculus), cluster 5 [TaxId:10090] [88555] (31 PDB entries)
  8. 287617Domain d1vfab_: 1vfa B: [19929]
    Other proteins in same PDB: d1vfaa_
    part of Fv D1.3

Details for d1vfab_

PDB Entry: 1vfa (more details), 1.8 Å

PDB Description: bound water molecules and conformational stabilization help mediate an antigen-antibody association
PDB Compounds: (B:)

SCOP Domain Sequences for d1vfab_:

Sequence; same for both SEQRES and ATOM records: (download)

>d1vfab_ b.1.1.1 (B:) Immunoglobulin heavy chain variable domain, VH {Mouse (Mus musculus), cluster 5}
qvqlqesgpglvapsqslsitctvsgfsltgygvnwvrqppgkglewlgmiwgdgntdyn
salksrlsiskdnsksqvflkmnslhtddtaryycarerdyrldywgqgttltvss

SCOP Domain Coordinates for d1vfab_:

Click to download the PDB-style file with coordinates for d1vfab_.
(The format of our PDB-style files is described here.)

Timeline for d1vfab_:

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d1vfaa_