Lineage for d1vfaa_ (1vfa A:)

  1. Root: SCOP 1.65
  2. 287094Class b: All beta proteins [48724] (126 folds)
  3. 287095Fold b.1: Immunoglobulin-like beta-sandwich [48725] (20 superfamilies)
    sandwich; 7 strands in 2 sheets; greek-key
    some members of the fold have additional strands
  4. 287096Superfamily b.1.1: Immunoglobulin [48726] (4 families) (S)
  5. 287097Family b.1.1.1: V set domains (antibody variable domain-like) [48727] (21 proteins)
  6. 287738Protein Immunoglobulin light chain kappa variable domain, VL-kappa [88519] (14 species)
    VL-kappa domains of human and mouse antibodies are clustered by the sequence similarity within the germline encoded segment and then by the size of the complementarity determining regions CDR1 and CDR2, so the clusters may correspond to putative germline families in the species genomes; VL-kappa domains with artificial or grafted exogeneous CDRs are listed as engineered species
  7. 288075Species Mouse (Mus musculus), cluster 4 [TaxId:10090] [88531] (146 PDB entries)
  8. 288079Domain d1vfaa_: 1vfa A: [19928]
    Other proteins in same PDB: d1vfab_
    part of Fv D1.3

Details for d1vfaa_

PDB Entry: 1vfa (more details), 1.8 Å

PDB Description: bound water molecules and conformational stabilization help mediate an antigen-antibody association
PDB Compounds: (A:)

SCOP Domain Sequences for d1vfaa_:

Sequence; same for both SEQRES and ATOM records: (download)

>d1vfaa_ b.1.1.1 (A:) Immunoglobulin light chain kappa variable domain, VL-kappa {Mouse (Mus musculus), cluster 4}
divltqspaslsasvgetvtitcrasgnihnylawyqqkqgkspqllvyytttladgvps
rfsgsgsgtqyslkinslqpedfgsyycqhfwstprtfgggtkleikr

SCOP Domain Coordinates for d1vfaa_:

Click to download the PDB-style file with coordinates for d1vfaa_.
(The format of our PDB-style files is described here.)

Timeline for d1vfaa_:

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d1vfab_