Lineage for d4fabl1 (4fab L:1-112)

  1. Root: SCOP 1.65
  2. 287094Class b: All beta proteins [48724] (126 folds)
  3. 287095Fold b.1: Immunoglobulin-like beta-sandwich [48725] (20 superfamilies)
    sandwich; 7 strands in 2 sheets; greek-key
    some members of the fold have additional strands
  4. 287096Superfamily b.1.1: Immunoglobulin [48726] (4 families) (S)
  5. 287097Family b.1.1.1: V set domains (antibody variable domain-like) [48727] (21 proteins)
  6. 287738Protein Immunoglobulin light chain kappa variable domain, VL-kappa [88519] (14 species)
    VL-kappa domains of human and mouse antibodies are clustered by the sequence similarity within the germline encoded segment and then by the size of the complementarity determining regions CDR1 and CDR2, so the clusters may correspond to putative germline families in the species genomes; VL-kappa domains with artificial or grafted exogeneous CDRs are listed as engineered species
  7. 287841Species Mouse (Mus musculus), cluster 1.1 [TaxId:10090] [88524] (98 PDB entries)
  8. 287961Domain d4fabl1: 4fab L:1-112 [19906]
    Other proteins in same PDB: d4fabh1, d4fabh2, d4fabl2
    part of Fab 4-4-20
    complexed with fds, mpd

Details for d4fabl1

PDB Entry: 4fab (more details), 2.7 Å

PDB Description: three-dimensional structure of a fluorescein-fab complex crystallized in 2-methyl-2,4-pentanediol
PDB Compounds: (L:)

SCOP Domain Sequences for d4fabl1:

Sequence; same for both SEQRES and ATOM records: (download)

>d4fabl1 b.1.1.1 (L:1-112) Immunoglobulin light chain kappa variable domain, VL-kappa {Mouse (Mus musculus), cluster 1.1}
dvvmtqtplslpvslgdqasiscrssqslvhsqgntylrwylqkpgqspkvliykvsnrf
sgvpdrfsgsgsgtdftlkisrveaedlgvyfcsqsthvpwtfgggtkleik

SCOP Domain Coordinates for d4fabl1:

Click to download the PDB-style file with coordinates for d4fabl1.
(The format of our PDB-style files is described here.)

Timeline for d4fabl1:

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Domains from same chain:
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d4fabl2