SCOPe 2.08: Domain d3axka2: 3axk A:151-462

Lineage for d3axka2 (3axk A:151-462)

1. Root: SCOPe 2.08

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.1: TIM beta/alpha-barrel [51350] (34 superfamilies)
   contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
   the first seven superfamilies have similar phosphate-binding sites

4. Superfamily c.1.14: RuBisCo, C-terminal domain [51649] (2 families)
   automatically mapped to Pfam PF00016

5. Family c.1.14.1: RuBisCo, large subunit, C-terminal domain [51650] (2 proteins)
   N-terminal domain is alpha+beta

6. Protein Ribulose 1,5-bisphosphate carboxylase-oxygenase [51651] (14 species)

7. Species Rice (Oryza sativa) [TaxId:4530] [117390] (5 PDB entries)
   Uniprot P12089

8. Domain d3axka2: 3axk A:151-462 [198947]
   Other proteins in same PDB: d3axka1, d3axkb1, d3axks_, d3axkt_
   automated match to d1wdda1
   complexed with gol, mg, ndp

Details for d3axka2

PDB Entry: 3axk, 1.9 Å

PDB Description: Structure of rice Rubisco in complex with NADP(H)

PDB Compounds: (A:) ribulose bisphosphate carboxylase large chain

SCOPe Domain Sequences for d3axka2:

Sequence, based on SEQRES records:

>d3axka2 c.1.14.1 (A:151-462) Ribulose 1,5-bisphosphate carboxylase-oxygenase {Rice (Oryza sativa) [TaxId: 4530]}
pphgiqverdklnkygrpllgctikpklglsaknygracyeclrggldftkddenvnsqp
fmrwrdrfvfcaeaiyksqaetgeikghylnatagtceemikravfarelgvpivmhdyl
tggftantslahycrdnglllhihramhavidrqknhgmhfrvlakalrmsggdhihagt
vvgklegeremtlgfvdllrddfiekdrargifftqdwvsmpgvipvasggihvwhmpal
teifgddsvlqfgggtlghpwgnapgaaanrvaleacvqarnegrdlaregneiirsack
wspelaaaceiw

Sequence, based on observed residues (ATOM records):

>d3axka2 c.1.14.1 (A:151-462) Ribulose 1,5-bisphosphate carboxylase-oxygenase {Rice (Oryza sativa) [TaxId: 4530]}
pphgiqverdklnkygrpllgctikpklglsaknygracyeclrggldftkddenvnsqp
fmrwrdrfvfcaeaiyksqaetgeikghylnatagtceemikravfarelgvpivmhdyl
tggftantslahycrdnglllhihramhavidrqknhgmhfrvlakalrmsggdhihagt
vveremtlgfvdllrddfiekdrargifftqdwvsmpgvipvasggihvwhmpalteifg
ddsvlqfgggtlghpwgnapgaaanrvaleacvqarnegrdlaregneiirsackwspel
aaaceiw

Timeline for d3axka2:

• d3axka2 first appeared in SCOPe 2.03
  
• d3axka2 appears in SCOPe 2.07