Lineage for d1mfbh1 (1mfb H:251-367)

  1. Root: SCOP 1.73
  2. 651986Class b: All beta proteins [48724] (165 folds)
  3. 651987Fold b.1: Immunoglobulin-like beta-sandwich [48725] (27 superfamilies)
    sandwich; 7 strands in 2 sheets; greek-key
    some members of the fold have additional strands
  4. 651988Superfamily b.1.1: Immunoglobulin [48726] (4 families) (S)
  5. 651989Family b.1.1.1: V set domains (antibody variable domain-like) [48727] (29 proteins)
  6. 652160Protein Immunoglobulin heavy chain variable domain, VH [88543] (20 species)
    VH domains of human and mouse antibodies are clustered by the sequence similarity within the germline encoded segment and then by the size of the complementarity determining regions CDR1 and CDR2, so the clusters may correspond to putative germline families in the species genomes; VH domains with artificial or grafted exogenous CDRs are listed as engineered species
  7. 652563Species Mouse (Mus musculus), cluster 3.2 [TaxId:10090] [88552] (148 PDB entries)
  8. 652603Domain d1mfbh1: 1mfb H:251-367 [19891]
    Other proteins in same PDB: d1mfbh2, d1mfbl1, d1mfbl2
    part of Fab SE155-4
    complexed with abe, gal, man, ram

Details for d1mfbh1

PDB Entry: 1mfb (more details), 2.1 Å

PDB Description: high resolution structures of antibody fab fragment complexed with cell-surface oligosaccharide of pathogenic salmonella
PDB Compounds: (H:) igg1-lambda se155-4 fab (heavy chain)

SCOP Domain Sequences for d1mfbh1:

Sequence; same for both SEQRES and ATOM records: (download)

>d1mfbh1 b.1.1.1 (H:251-367) Immunoglobulin heavy chain variable domain, VH {Mouse (Mus musculus), cluster 3.2 [TaxId: 10090]}
evqvqqsgtvlarpgasvkmsckasgytftnywmhwikqrpgqglewigaiypgnsatfy
nhkfraktkltavtstitaymelssltnedsavyyctrgghgyygdywgqgasltvs

SCOP Domain Coordinates for d1mfbh1:

Click to download the PDB-style file with coordinates for d1mfbh1.
(The format of our PDB-style files is described here.)

Timeline for d1mfbh1:

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Domains from same chain:
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d1mfbh2