SCOPe 2.06: Domain d2ya3e1: 2ya3 E:25-181

Lineage for d2ya3e1 (2ya3 E:25-181)

1. Root: SCOPe 2.06

2. Class d: Alpha and beta proteins (a+b) [53931] (385 folds)

3. Fold d.37: CBS-domain pair [54630] (1 superfamily)
   duplication: tandem repeat of two beta-X-beta-alpha-beta(2)-alpha motifs of similar sequences; 4 layers: a/b/b/a

4. Superfamily d.37.1: CBS-domain pair [54631] (2 families)

5. Family d.37.1.1: CBS-domain pair [54632] (21 proteins)
   Pfam PF00571; pairs of CBS domains dimerize to form a stable globular domain, a.k.a. Bateman domain

6. Protein 5'-AMP-activated protein kinase subunit gamma-1, AMPKg [160176] (1 species)

7. Species Norway rat (Rattus norvegicus) [TaxId:10116] [160177] (10 PDB entries)
   Uniprot P80385 182-326! Uniprot P80385 23-181

8. Domain d2ya3e1: 2ya3 E:25-181 [198695]
   Other proteins in same PDB: d2ya3a1, d2ya3a2, d2ya3a3, d2ya3b_
   automated match to d2v8qe2
   complexed with amp, j7v

Details for d2ya3e1

PDB Entry: 2ya3, 2.5 Å

PDB Description: structure of the regulatory fragment of mammalian ampk in complex with coumarin adp

PDB Compounds: (E:) 5'-amp-activated protein kinase subunit gamma-1

SCOPe Domain Sequences for d2ya3e1:

Sequence; same for both SEQRES and ATOM records:

>d2ya3e1 d.37.1.1 (E:25-181) 5'-AMP-activated protein kinase subunit gamma-1, AMPKg {Norway rat (Rattus norvegicus) [TaxId: 10116]}
ssvyttfmkshrcydliptssklvvfdtslqvkkaffalvtngvraaplwdskkqsfvgm
ltitdfinilhryyksalvqiyeleehkietwrevylqdsfkplvcispnaslfdavssl
irnkihrlpvidpesgntlyilthkrilkflklfite

Timeline for d2ya3e1:

• d2ya3e1 first appeared in SCOPe 2.03
  
• d2ya3e1 appears in SCOPe 2.05
  
• d2ya3e1 appears in SCOPe 2.07
  
• d2ya3e1 appears in the current release, SCOPe 2.08