SCOPe 2.08: Domain d2v3ta_: 2v3t A:

Lineage for d2v3ta_ (2v3t A:)

1. Root: SCOPe 2.08

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.94: Periplasmic binding protein-like II [53849] (1 superfamily)
   consists of two similar intertwined domain with 3 layers (a/b/a) each: duplication
   mixed beta-sheet of 5 strands, order 21354; strand 5 is antiparallel to the rest

4. Superfamily c.94.1: Periplasmic binding protein-like II [53850] (4 families)
   Similar in architecture to the superfamily I but partly differs in topology

5. Family c.94.1.0: automated matches [191309] (1 protein)
   not a true family

6. Protein automated matches [190039] (161 species)
   not a true protein

7. Species Norway rat (Rattus norvegicus) [TaxId:10116] [186759] (113 PDB entries)

8. Domain d2v3ta_: 2v3t A: [198380]
   automated match to d2v3tb_
   complexed with ca

Details for d2v3ta_

PDB Entry: 2v3t, 2.75 Å

PDB Description: structure of the ligand-binding core of the ionotropic glutamate receptor-like glurdelta2 in the apo form

PDB Compounds: (A:) glutamate receptor delta-2 subunit synonym glurdelta2, glur delta-2

SCOPe Domain Sequences for d2v3ta_:

Sequence, based on SEQRES records:

>d2v3ta_ c.94.1.0 (A:) automated matches {Norway rat (Rattus norvegicus) [TaxId: 10116]}
gvvlrvvtvleepfvmvsenvlgkpkkyqgfsidvldalsnylgfnyeiyvapdhkygsp
qedgtwnglvgelvfkradigisaltitpdrenvvdfttrymdysvgvllrrgtsiqslq
dlskqtdipygtvldsavyqhvrmkglnpferdsmysqmwrminrsngsennvlesqagi
qkvkygnyafvwdaavleyvaindpdcsfytvgntvadrgygialqhgspyrdvfsqril
elqqsgdmdilkhkwwpkngqcd

Sequence, based on observed residues (ATOM records):

>d2v3ta_ c.94.1.0 (A:) automated matches {Norway rat (Rattus norvegicus) [TaxId: 10116]}
gvvlrvvtvleepfvmvsenvlgkpkkyqgfsidvldalsnylgfnyeiyvapdhkygsp
twnglvgelvfkradigisaltitpdrenvvdfttrymdysvgvllrrsiqslqdlskqt
dipygtvldsavyqhvrmkglnpsmysqmwrminnnvlesqagiqkvkygnyafvwdaav
leyvaindpdcsfytvtvadrgygialqhgspyrdvfsqrilelqqsgdmdilkhkwwpk
ngqcd

Timeline for d2v3ta_:

• d2v3ta_ first appeared in SCOPe 2.03
  
• d2v3ta_ appears in SCOPe 2.07