Lineage for d2v3ta_ (2v3t A:)

  1. Root: SCOPe 2.08
  2. 2826024Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2913607Fold c.94: Periplasmic binding protein-like II [53849] (1 superfamily)
    consists of two similar intertwined domain with 3 layers (a/b/a) each: duplication
    mixed beta-sheet of 5 strands, order 21354; strand 5 is antiparallel to the rest
  4. 2913608Superfamily c.94.1: Periplasmic binding protein-like II [53850] (4 families) (S)
    Similar in architecture to the superfamily I but partly differs in topology
  5. 2915150Family c.94.1.0: automated matches [191309] (1 protein)
    not a true family
  6. 2915151Protein automated matches [190039] (161 species)
    not a true protein
  7. 2915760Species Norway rat (Rattus norvegicus) [TaxId:10116] [186759] (113 PDB entries)
  8. 2915951Domain d2v3ta_: 2v3t A: [198380]
    automated match to d2v3tb_
    complexed with ca

Details for d2v3ta_

PDB Entry: 2v3t (more details), 2.75 Å

PDB Description: structure of the ligand-binding core of the ionotropic glutamate receptor-like glurdelta2 in the apo form
PDB Compounds: (A:) glutamate receptor delta-2 subunit synonym glurdelta2, glur delta-2

SCOPe Domain Sequences for d2v3ta_:

Sequence, based on SEQRES records: (download)

>d2v3ta_ c.94.1.0 (A:) automated matches {Norway rat (Rattus norvegicus) [TaxId: 10116]}
gvvlrvvtvleepfvmvsenvlgkpkkyqgfsidvldalsnylgfnyeiyvapdhkygsp
qedgtwnglvgelvfkradigisaltitpdrenvvdfttrymdysvgvllrrgtsiqslq
dlskqtdipygtvldsavyqhvrmkglnpferdsmysqmwrminrsngsennvlesqagi
qkvkygnyafvwdaavleyvaindpdcsfytvgntvadrgygialqhgspyrdvfsqril
elqqsgdmdilkhkwwpkngqcd

Sequence, based on observed residues (ATOM records): (download)

>d2v3ta_ c.94.1.0 (A:) automated matches {Norway rat (Rattus norvegicus) [TaxId: 10116]}
gvvlrvvtvleepfvmvsenvlgkpkkyqgfsidvldalsnylgfnyeiyvapdhkygsp
twnglvgelvfkradigisaltitpdrenvvdfttrymdysvgvllrrsiqslqdlskqt
dipygtvldsavyqhvrmkglnpsmysqmwrminnnvlesqagiqkvkygnyafvwdaav
leyvaindpdcsfytvtvadrgygialqhgspyrdvfsqrilelqqsgdmdilkhkwwpk
ngqcd

SCOPe Domain Coordinates for d2v3ta_:

Click to download the PDB-style file with coordinates for d2v3ta_.
(The format of our PDB-style files is described here.)

Timeline for d2v3ta_: