Lineage for d2rkia3 (2rki A:430-557)

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2122050Fold c.55: Ribonuclease H-like motif [53066] (7 superfamilies)
    3 layers: a/b/a; mixed beta-sheet of 5 strands, order 32145; strand 2 is antiparallel to the rest
  4. 2123751Superfamily c.55.3: Ribonuclease H-like [53098] (15 families) (S)
    consists of one domain of this fold
  5. 2123752Family c.55.3.1: Ribonuclease H [53099] (5 protein domains)
  6. 2123803Protein HIV RNase H (Domain of reverse transcriptase) [53105] (3 species)
  7. 2123813Species Human immunodeficiency virus type 1 [TaxId:11676] [53106] (104 PDB entries)
    Uniprot P04585 159-692 # chain A coverage; chain B is shorter: 162-582 ! Uniprot P03366 186-725 # chain A coverage; chain B coverage: 156-584 ! Uniprot P04585 158-698 # chain A coverage; chain B is shorter: 159-595
  8. 2123821Domain d2rkia3: 2rki A:430-557 [198343]
    Other proteins in same PDB: d2rkia2, d2rkib_
    automated match to d1c1ba1
    protein/DNA complex; protein/RNA complex; complexed with cl, gol, mg, so4, tt1

Details for d2rkia3

PDB Entry: 2rki (more details), 2.3 Å

PDB Description: Crystal Structure of HIV-1 Reverse Transcriptase (RT) in Complex with a triazole derived NNRTI
PDB Compounds: (A:) HIV-1 reverse transcriptase (RT) p66

SCOPe Domain Sequences for d2rkia3:

Sequence; same for both SEQRES and ATOM records: (download)

>d2rkia3 c.55.3.1 (A:430-557) HIV RNase H (Domain of reverse transcriptase) {Human immunodeficiency virus type 1 [TaxId: 11676]}

SCOPe Domain Coordinates for d2rkia3:

Click to download the PDB-style file with coordinates for d2rkia3.
(The format of our PDB-style files is described here.)

Timeline for d2rkia3:

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