Lineage for d1ifhl1 (1ifh L:1-108)

  1. Root: SCOP 1.65
  2. 287094Class b: All beta proteins [48724] (126 folds)
  3. 287095Fold b.1: Immunoglobulin-like beta-sandwich [48725] (20 superfamilies)
    sandwich; 7 strands in 2 sheets; greek-key
    some members of the fold have additional strands
  4. 287096Superfamily b.1.1: Immunoglobulin [48726] (4 families) (S)
  5. 287097Family b.1.1.1: V set domains (antibody variable domain-like) [48727] (21 proteins)
  6. 287738Protein Immunoglobulin light chain kappa variable domain, VL-kappa [88519] (14 species)
    VL-kappa domains of human and mouse antibodies are clustered by the sequence similarity within the germline encoded segment and then by the size of the complementarity determining regions CDR1 and CDR2, so the clusters may correspond to putative germline families in the species genomes; VL-kappa domains with artificial or grafted exogeneous CDRs are listed as engineered species
  7. 287964Species Mouse (Mus musculus), cluster 1.2 [TaxId:10090] [88525] (22 PDB entries)
  8. 287988Domain d1ifhl1: 1ifh L:1-108 [19790]
    Other proteins in same PDB: d1ifhh1, d1ifhh2, d1ifhl2
    part of Fab 17/9

Details for d1ifhl1

PDB Entry: 1ifh (more details), 2.8 Å

PDB Description: a detailed analysis of the free and bound conformation of an antibody: x-ray structures of anti-peptide fab 17(slash)9 and three different fab-peptide complexes

SCOP Domain Sequences for d1ifhl1:

Sequence; same for both SEQRES and ATOM records: (download)

>d1ifhl1 b.1.1.1 (L:1-108) Immunoglobulin light chain kappa variable domain, VL-kappa {Mouse (Mus musculus), cluster 1.2}
divmtqspssltvtagekvtmsctssqslfnsgkqknyltwyqqkpgqppkvliywastr
esgvpdrftgsgsgtdftltissvqaedlavyycqndysnpltfgggtklelkr

SCOP Domain Coordinates for d1ifhl1:

Click to download the PDB-style file with coordinates for d1ifhl1.
(The format of our PDB-style files is described here.)

Timeline for d1ifhl1:

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Domains from same chain:
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d1ifhl2