Lineage for d1bbdl1 (1bbd L:1-114)

  1. Root: SCOP 1.75
  2. 781541Class b: All beta proteins [48724] (174 folds)
  3. 781542Fold b.1: Immunoglobulin-like beta-sandwich [48725] (28 superfamilies)
    sandwich; 7 strands in 2 sheets; greek-key
    some members of the fold have additional strands
  4. 781543Superfamily b.1.1: Immunoglobulin [48726] (4 families) (S)
  5. 781544Family b.1.1.1: V set domains (antibody variable domain-like) [48727] (32 proteins)
  6. 782637Protein Immunoglobulin light chain kappa variable domain, VL-kappa [88519] (16 species)
    VL-kappa domains of human and mouse antibodies are clustered by the sequence similarity within the germline encoded segment and then by the size of the complementarity determining regions CDR1 and CDR2, so the clusters may correspond to putative germline families in the species genomes; VL-kappa domains with artificial or grafted exogenous CDRs are listed as engineered species
  7. 783027Species Mouse (Mus musculus), cluster 1.2 [TaxId:10090] [88525] (36 PDB entries)
  8. 783070Domain d1bbdl1: 1bbd L:1-114 [19782]
    Other proteins in same PDB: d1bbdh1, d1bbdh2, d1bbdl2
    part of Fab 8F5
    complexed with so4

Details for d1bbdl1

PDB Entry: 1bbd (more details), 2.8 Å

PDB Description: three dimensional structure of the fab fragment of a neutralizing antibody to human rhinovirus serotype 2
PDB Compounds: (L:) igg2a-kappa 8f5 fab (light chain)

SCOP Domain Sequences for d1bbdl1:

Sequence; same for both SEQRES and ATOM records: (download)

>d1bbdl1 b.1.1.1 (L:1-114) Immunoglobulin light chain kappa variable domain, VL-kappa {Mouse (Mus musculus), cluster 1.2 [TaxId: 10090]}

SCOP Domain Coordinates for d1bbdl1:

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Timeline for d1bbdl1:

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