Lineage for d1bafl1 (1baf L:1-108)

  1. Root: SCOP 1.69
  2. 450777Class b: All beta proteins [48724] (144 folds)
  3. 450778Fold b.1: Immunoglobulin-like beta-sandwich [48725] (23 superfamilies)
    sandwich; 7 strands in 2 sheets; greek-key
    some members of the fold have additional strands
  4. 450779Superfamily b.1.1: Immunoglobulin [48726] (4 families) (S)
  5. 450780Family b.1.1.1: V set domains (antibody variable domain-like) [48727] (27 proteins)
  6. 451612Protein Immunoglobulin light chain kappa variable domain, VL-kappa [88519] (14 species)
    VL-kappa domains of human and mouse antibodies are clustered by the sequence similarity within the germline encoded segment and then by the size of the complementarity determining regions CDR1 and CDR2, so the clusters may correspond to putative germline families in the species genomes; VL-kappa domains with artificial or grafted exogenous CDRs are listed as engineered species
  7. 452004Species Mouse (Mus musculus), cluster 3.2 [TaxId:10090] [88528] (19 PDB entries)
  8. 452015Domain d1bafl1: 1baf L:1-108 [19778]
    Other proteins in same PDB: d1bafh1, d1bafh2, d1bafl2
    part of Fab ANO2

Details for d1bafl1

PDB Entry: 1baf (more details), 2.9 Å

PDB Description: 2.9 angstroms resolution structure of an anti-dinitrophenyl-spin-label monoclonal antibody fab fragment with bound hapten

SCOP Domain Sequences for d1bafl1:

Sequence; same for both SEQRES and ATOM records: (download)

>d1bafl1 b.1.1.1 (L:1-108) Immunoglobulin light chain kappa variable domain, VL-kappa {Mouse (Mus musculus), cluster 3.2}
qivltqspaimsaspgekvtmtcsasssvyymywyqqkpgssprlliydtsnlasgvpvr
fsgsgsgtsysltisrmeaedaatyycqqwssyppitfgvgtklelkr

SCOP Domain Coordinates for d1bafl1:

Click to download the PDB-style file with coordinates for d1bafl1.
(The format of our PDB-style files is described here.)

Timeline for d1bafl1:

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Domains from same chain:
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d1bafl2