SCOP 1.65: Domain d1igyc1: 1igy C:2-107

Lineage for d1igyc1 (1igy C:2-107)

Root: SCOP 1.65
Class b: All beta proteins [48724] (126 folds)
Fold b.1: Immunoglobulin-like beta-sandwich [48725] (20 superfamilies)
sandwich; 7 strands in 2 sheets; greek-key
some members of the fold have additional strands
Superfamily b.1.1: Immunoglobulin [48726] (4 families)
Family b.1.1.1: V set domains (antibody variable domain-like) [48727] (21 proteins)

Protein Immunoglobulin light chain kappa variable domain, VL-kappa [88519] (14 species)
VL-kappa domains of human and mouse antibodies are clustered by the sequence similarity within the germline encoded segment and then by the size of the complementarity determining regions CDR1 and CDR2, so the clusters may correspond to putative germline families in the species genomes; VL-kappa domains with artificial or grafted exogeneous CDRs are listed as engineered species

Species Mouse (Mus musculus), cluster 4 [TaxId:10090] [88531] (146 PDB entries)

Domain d1igyc1: 1igy C:2-107 [19770]
Other proteins in same PDB: d1igya2, d1igyb1, d1igyb2, d1igyb3, d1igyb4, d1igyc2, d1igyd1, d1igyd2, d1igyd3, d1igyd4
part of intact IgG1 antibody Mab61.1.3
complexed with fuc, gal, man, nag

Details for d1igyc1

PDB Entry: 1igy (more details), 3.2 Å

PDB Description: structure of immunoglobulin

SCOP Domain Sequences for d1igyc1:

Sequence; same for both SEQRES and ATOM records: (download)

>d1igyc1 b.1.1.1 (C:2-107) Immunoglobulin light chain kappa variable domain, VL-kappa {Mouse (Mus musculus), cluster 4}
kcahtvsksmsmsvgervtltckasenvvtyvswyqqkpeqspklliygasnrytgvpdr
ftgsgsatdftltissvqaedladyhcgqgysypytfgggtkleik

SCOP Domain Coordinates for d1igyc1:

Click to download the PDB-style file with coordinates for d1igyc1.
(The format of our PDB-style files is described here.)

Timeline for d1igyc1: