Lineage for d1igtd1 (1igt D:1-114)

  1. Root: SCOP 1.71
  2. 546417Class b: All beta proteins [48724] (149 folds)
  3. 546418Fold b.1: Immunoglobulin-like beta-sandwich [48725] (25 superfamilies)
    sandwich; 7 strands in 2 sheets; greek-key
    some members of the fold have additional strands
  4. 546419Superfamily b.1.1: Immunoglobulin [48726] (4 families) (S)
  5. 546420Family b.1.1.1: V set domains (antibody variable domain-like) [48727] (28 proteins)
  6. 546556Protein Immunoglobulin heavy chain variable domain, VH [88543] (20 species)
    VH domains of human and mouse antibodies are clustered by the sequence similarity within the germline encoded segment and then by the size of the complementarity determining regions CDR1 and CDR2, so the clusters may correspond to putative germline families in the species genomes; VH domains with artificial or grafted exogenous CDRs are listed as engineered species
  7. 546768Species Mouse (Mus musculus), cluster 2.2 [TaxId:10090] [88550] (49 PDB entries)
  8. 546808Domain d1igtd1: 1igt D:1-114 [19767]
    Other proteins in same PDB: d1igta1, d1igta2, d1igtb2, d1igtb3, d1igtb4, d1igtc1, d1igtc2, d1igtd2, d1igtd3, d1igtd4
    part of intact IgG2a antibody Mab231
    complexed with fuc, gal, man, nag

Details for d1igtd1

PDB Entry: 1igt (more details), 2.8 Å

PDB Description: structure of immunoglobulin

SCOP Domain Sequences for d1igtd1:

Sequence; same for both SEQRES and ATOM records: (download)

>d1igtd1 b.1.1.1 (D:1-114) Immunoglobulin heavy chain variable domain, VH {Mouse (Mus musculus), cluster 2.2}
evklqesggglvqpggslklscatsgftfsdyymywvrqtpekrlewvayisngggstyy
pdtvkgrftisrdnakntlylqmsrlksedtamyycarhggyyamdywgqgttvtvssa

SCOP Domain Coordinates for d1igtd1:

Click to download the PDB-style file with coordinates for d1igtd1.
(The format of our PDB-style files is described here.)

Timeline for d1igtd1: