SCOPe 2.06: Domain d1uppg1: 1upp G:9-147

Lineage for d1uppg1 (1upp G:9-147)

1. Root: SCOPe 2.06

2. Class d: Alpha and beta proteins (a+b) [53931] (385 folds)

3. Fold d.58: Ferredoxin-like [54861] (59 superfamilies)
   alpha+beta sandwich with antiparallel beta-sheet; (beta-alpha-beta)x2

4. Superfamily d.58.9: RuBisCO, large subunit, small (N-terminal) domain [54966] (2 families)
   C-terminal domain is beta/alpha barrel

5. Family d.58.9.1: Ribulose 1,5-bisphosphate carboxylase-oxygenase [54967] (1 protein)

6. Protein Ribulose 1,5-bisphosphate carboxylase-oxygenase [54968] (12 species)

7. Species Spinach (Spinacia oleracea) [TaxId:3562] [54970] (11 PDB entries)

8. Domain d1uppg1: 1upp G:9-147 [197577]
   Other proteins in same PDB: d1uppa2, d1uppc2, d1uppe2, d1uppg2, d1uppi_, d1uppj_, d1uppk_, d1uppl_
   automated match to d8ruca2
   complexed with ca, cap

Details for d1uppg1

PDB Entry: 1upp, 2.3 Å

PDB Description: spinach rubisco in complex with 2-carboxyarabinitol 2 bisphosphate and calcium.

PDB Compounds: (G:) ribulose bisphosphate carboxylase large chain

SCOPe Domain Sequences for d1uppg1:

Sequence; same for both SEQRES and ATOM records:

>d1uppg1 d.58.9.1 (G:9-147) Ribulose 1,5-bisphosphate carboxylase-oxygenase {Spinach (Spinacia oleracea) [TaxId: 3562]}
asvefkagvkdykltyytpeyetldtdilaafrvspqpgvppeeagaavaaesstgtwtt
vwtdgltnldrykgrcyhiepvageenqyicyvaypldlfeegsvtnmftsivgnvfgfk
alralrledlripvayvkt

Timeline for d1uppg1:

• d1uppg1 first appeared in SCOPe 2.03
  
• d1uppg1 appears in SCOPe 2.05
  
• d1uppg1 appears in SCOPe 2.07
  
• d1uppg1 appears in the current release, SCOPe 2.08