Lineage for d1do8c3 (1do8 C:2280-2573)

  1. Root: SCOPe 2.06
  2. 2089713Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2102557Fold c.2: NAD(P)-binding Rossmann-fold domains [51734] (1 superfamily)
    core: 3 layers, a/b/a; parallel beta-sheet of 6 strands, order 321456
    The nucleotide-binding modes of this and the next two folds/superfamilies are similar
  4. 2102558Superfamily c.2.1: NAD(P)-binding Rossmann-fold domains [51735] (13 families) (S)
  5. 2106264Family c.2.1.7: Aminoacid dehydrogenase-like, C-terminal domain [51883] (12 proteins)
    extra N-terminal helix displaces the C-terminal helix (following strand 6) from its usual position creating a family nicotineamide-binding site
  6. 2106424Protein Mitochondrial NAD(P)-dependent malic enzyme [51898] (3 species)
    includes C-terminal additional subdomains
  7. 2106442Species Human (Homo sapiens) [TaxId:9606] [51899] (10 PDB entries)
  8. 2106465Domain d1do8c3: 1do8 C:2280-2573 [197455]
    Other proteins in same PDB: d1do8a2, d1do8b4, d1do8c4, d1do8d4
    complexed with mn, nad, oxl

Details for d1do8c3

PDB Entry: 1do8 (more details), 2.2 Å

PDB Description: crystal structure of a closed form of human mitochondrial nad(p)+- dependent malic enzyme
PDB Compounds: (C:) malic enzyme

SCOPe Domain Sequences for d1do8c3:

Sequence; same for both SEQRES and ATOM records: (download)

>d1do8c3 c.2.1.7 (C:2280-2573) Mitochondrial NAD(P)-dependent malic enzyme {Human (Homo sapiens) [TaxId: 9606]}
iqgtaavalagllaaqkviskpisehkilflgageaalgianlivmsmvenglseqeaqk
kiwmfdkygllvkgrkakidsyqepfthsapesipdtfedavnilkpstiigvagagrlf
tpdviramasinerpvifalsnptaqaectaeeaytltegrclfasgspfgpvkltdgrv
ftpgqgnnvyifpgvalavilcntrhisdsvfleaakaltsqltdeelaqgrlypplani
qevsiniaikvteylyankmafrypepedkakyvkertwrseydsllpdvyewp

SCOPe Domain Coordinates for d1do8c3:

Click to download the PDB-style file with coordinates for d1do8c3.
(The format of our PDB-style files is described here.)

Timeline for d1do8c3: