SCOPe 2.02: Domain d3vmja_: 3vmj A:

Lineage for d3vmja_ (3vmj A:)

1. Root: SCOPe 2.02

2. Class c: Alpha and beta proteins (a/b) [51349] (147 folds)

3. Fold c.77: Isocitrate/Isopropylmalate dehydrogenase-like [53658] (1 superfamily)
   consists of two intertwined (sub)domains related by pseudo dyad; duplication
   3 layers: a/b/a; single mixed beta-sheet of 10 strands, order 213A945867 (A=10); strands from 5 to 9 are antiparallel to the rest

4. Superfamily c.77.1: Isocitrate/Isopropylmalate dehydrogenase-like [53659] (6 families)
   the constituent families form similar dimers

5. Family c.77.1.1: Dimeric isocitrate & isopropylmalate dehydrogenases [53660] (4 proteins)
   the active site is between the two identical subunits

6. Protein automated matches [190072] (15 species)
   not a true protein

7. Species Shewanella oneidensis, [TaxId:211586] [194175] (3 PDB entries)

8. Domain d3vmja_: 3vmj A: [197351]
   automated match to d1cnza_
   complexed with cl, ipm, mg

Details for d3vmja_

PDB Entry: 3vmj, 1.56 Å

PDB Description: 3-isopropylmalate dehydrogenase from shewanella oneidensis mr-1

PDB Compounds: (A:) 3-isopropylmalate dehydrogenase

SCOPe Domain Sequences for d3vmja_:

Sequence; same for both SEQRES and ATOM records:

>d3vmja_ c.77.1.1 (A:) automated matches {Shewanella oneidensis, [TaxId: 211586]}
ssyqiavlagdgigpevmaearkvlkavearfglnieyteydvggiaidnhgcplpeatl
kgceaadailfgsvggpkweklppneqpergallplrghfelfcnlrpaklhdglehmsp
lrsdisargfdvlcvreltggiyfgkpkgrqgegeseeafdtmrysrreisriariafea
argrrkkvtsvdkanvlacsvlwrqvveevavdfpdvelehiyidnatmqllrrpdefdv
mlcsnlfgdilsdeiamltgsmgllssasmnstgfglfepaggsapdiagkgianpiaqi
lsaalmlrhslkqeeaasaieravtkalnsgyltgellssdqrhkakttvqmgdfiadav
kagv

Timeline for d3vmja_:

• d3vmja_ is new in SCOPe 2.02-stable
  
• d3vmja_ appears in SCOPe 2.03
  
• d3vmja_ appears in the current release, SCOPe 2.08, called d3vmja1