Lineage for Species: Human (Homo sapiens) [TaxId: 9606]

  1. Root: SCOPe 2.08
  2. Class d: Alpha and beta proteins (a+b) [53931] (396 folds)
  3. Fold d.3: Cysteine proteinases [54000] (1 superfamily)
    consists of one alpha-helix and 4 strands of antiparallel beta-sheet and contains the catalytic triad Cys-His-Asn
  4. Superfamily d.3.1: Cysteine proteinases [54001] (24 families) (S)
    the constitute families differ by insertion into and circular permutation of the common catalytic core made of one alpha-helix and 3-strands of beta-sheet
  5. Family d.3.1.11: Ubiquitin thiolesterase protein OTUB2 (Otubain-2) [110773] (2 proteins)
    probably the same as Pfam PF02338, OTU-like cysteine protease, but 1TFF (Uniprot Q96DC9) was not detected by the Pfam model
  6. Protein automated matches [197305] (1 species)
    not a true protein
  7. Species Human (Homo sapiens) [TaxId:9606] [197306] (13 PDB entries)

PDB entries in Species: Human (Homo sapiens) [TaxId: 9606]:

  1. Domain(s) for 4fjv:
    1. Domain d4fjva1: 4fjv A:3-232 [197307]
      Other proteins in same PDB: d4fjva2, d4fjvb1, d4fjvb2, d4fjvd1, d4fjvd2
      automated match to d1tffa_
      complexed with gol, neh
    2. Domain d4fjvc_: 4fjv C: [202037]
      Other proteins in same PDB: d4fjva2, d4fjvb1, d4fjvb2, d4fjvd1, d4fjvd2
      automated match to d4fjva_
      complexed with gol, neh
  2. Domain(s) for 5qio:
  3. Domain(s) for 5qip:
  4. Domain(s) for 5qiq:
  5. Domain(s) for 5qir:
  6. Domain(s) for 5qis:
  7. Domain(s) for 5qit:
  8. Domain(s) for 5qiu:
  9. Domain(s) for 5qiv:
  10. Domain(s) for 5qiw:
  11. Domain(s) for 5qix:
  12. Domain(s) for 5qiy:
  13. Domain(s) for 5qiz:

More info for Species Human (Homo sapiens) [TaxId:9606] from d.3.1.11 automated matches

Timeline for Species Human (Homo sapiens) [TaxId:9606] from d.3.1.11 automated matches: