Lineage for Species: Clostridium difficile [TaxId: 272563]

  1. Root: SCOPe 2.07
  2. 2413226Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2485906Fold c.94: Periplasmic binding protein-like II [53849] (1 superfamily)
    consists of two similar intertwined domain with 3 layers (a/b/a) each: duplication
    mixed beta-sheet of 5 strands, order 21354; strand 5 is antiparallel to the rest
  4. 2485907Superfamily c.94.1: Periplasmic binding protein-like II [53850] (4 families) (S)
    Similar in architecture to the superfamily I but partly differs in topology
  5. 2487255Family c.94.1.0: automated matches [191309] (1 protein)
    not a true family
  6. 2487256Protein automated matches [190039] (146 species)
    not a true protein
  7. 2487491Species Clostridium difficile [TaxId:272563] [197037] (2 PDB entries)

PDB entries in Species: Clostridium difficile [TaxId: 272563]:

  1. Domain(s) for 4kd5:
    1. 2487494Domain d4kd5a_: 4kd5 A: [197038]
      automated match to d1amfa_
      complexed with fmt, sbt, so4
    2. 2487495Domain d4kd5b_: 4kd5 B: [197039]
      automated match to d1amfa_
      complexed with fmt, sbt, so4
    3. 2487496Domain d4kd5c_: 4kd5 C: [202843]
      automated match to d4kd5a_
      complexed with fmt, sbt, so4
    4. 2487497Domain d4kd5d_: 4kd5 D: [202844]
      automated match to d4kd5a_
      complexed with fmt, sbt, so4
  2. Domain(s) for 4ote:
    1. 2487492Domain d4otea_: 4ote A: [237885]
      automated match to d4ef1b_
      complexed with act, cl, gol, mse, zn
    2. 2487493Domain d4oteb_: 4ote B: [237886]
      automated match to d4ef1b_
      complexed with act, cl, gol, mse, zn

More info for Species Clostridium difficile [TaxId:272563] from c.94.1.0 automated matches

Timeline for Species Clostridium difficile [TaxId:272563] from c.94.1.0 automated matches: