SCOPe 2.07: Domain d4k8la1: 4k8l A:1-332

Lineage for d4k8la1 (4k8l A:1-332)

1. Root: SCOPe 2.07

2. Class d: Alpha and beta proteins (a+b) [53931] (388 folds)

3. Fold d.21: Diaminopimelate epimerase-like [54505] (1 superfamily)
   mixed beta-sheet folds into a barrel (n=8, S=14) around the central helix

4. Superfamily d.21.1: Diaminopimelate epimerase-like [54506] (5 families)
   duplication: consists of two similar domain swapped with C-terminal strands

5. Family d.21.1.3: Proline racemase [110863] (2 proteins)
   Pfam PF05544

6. Protein automated matches [196979] (1 species)
   not a true protein

7. Species Ochrobactrum anthropi [TaxId:439375] [196980] (1 PDB entry)

8. Domain d4k8la1: 4k8l A:1-332 [196981]
   Other proteins in same PDB: d4k8la2
   automated match to d1tm0a_

Details for d4k8la1

PDB Entry: 4k8l, 1.9 Å

PDB Description: crystal structure of a putative 4-hydroxyproline epimerase/3- hydroxyproline dehydratse from the soil bacterium ochrobacterium anthropi, target efi-506495, disordered loops

PDB Compounds: (A:) proline racemase

SCOPe Domain Sequences for d4k8la1:

Sequence, based on SEQRES records:

>d4k8la1 d.21.1.3 (A:1-332) automated matches {Ochrobactrum anthropi [TaxId: 439375]}
mrstkvihivgchaegevgdvivggvapppgktvweqsrfiasdetlrnfvlneprggvf
rhvnllvppkdpraqmgfiimepadtppmsgsnsicvstvlldsgiipmqepvtrmvlea
pgglieveaecrngkaerisvrnvpsfadrlnasleveglgtitvdtayggdsfvivdaa
sigmkiepgqarelaeigvkitkaaneqlgfrhpekdwnhisfcqitepvtrdgdiltgv
ntvairpakldrsptgtgcsarmavlhakgqmkvgerfigksvlgtefhcrldktlelgg
kpaispiisgrawvtgtsqlmldpsdpfpsgy

Sequence, based on observed residues (ATOM records):

>d4k8la1 d.21.1.3 (A:1-332) automated matches {Ochrobactrum anthropi [TaxId: 439375]}
mrstkvihivgchaegevgdvivggvapppgktvweqsrfiasdetlrnfvlneprggvf
rhvnllvppkdpraqmgfiimepadtppmsgsnsicvstvlldsgiipmqepvtrmvlea
pgglieveaecrngkaerisvrnvpsfadrlnaslevgtitvdtayggdsfvivdaasig
melaeigvkitkaaneqlgfrhpekdwnhisfcqitepvtrdgdiltgvntvaitgtgcs
armavlhakgqmkvgerfighcrldktlelggkpaispiisgrawvtgtsqlmldpsdpf
psgy

Timeline for d4k8la1:

• d4k8la1 first appeared in SCOPe 2.02, called d4k8la_
  
• d4k8la1 appears in SCOPe 2.06
  
• d4k8la1 appears in the current release, SCOPe 2.08