Lineage for d4k8la1 (4k8l A:1-332)

  1. Root: SCOPe 2.06
  2. 2152203Class d: Alpha and beta proteins (a+b) [53931] (385 folds)
  3. 2164557Fold d.21: Diaminopimelate epimerase-like [54505] (1 superfamily)
    mixed beta-sheet folds into a barrel (n=8, S=14) around the central helix
  4. 2164558Superfamily d.21.1: Diaminopimelate epimerase-like [54506] (5 families) (S)
    duplication: consists of two similar domain swapped with C-terminal strands
  5. 2164657Family d.21.1.3: Proline racemase [110863] (2 protein domains)
    Pfam PF05544
  6. 2164662Protein automated matches [196979] (1 species)
    not a true protein
  7. 2164663Species Ochrobactrum anthropi [TaxId:439375] [196980] (1 PDB entry)
  8. 2164664Domain d4k8la1: 4k8l A:1-332 [196981]
    Other proteins in same PDB: d4k8la2
    automated match to d1tm0a_

Details for d4k8la1

PDB Entry: 4k8l (more details), 1.9 Å

PDB Description: Crystal structure of a putative 4-hydroxyproline epimerase/3-hydroxyproline dehydratse from the soil bacterium ochrobacterium anthropi, target efi-506495, disordered loops
PDB Compounds: (A:) proline racemase

SCOPe Domain Sequences for d4k8la1:

Sequence, based on SEQRES records: (download)

>d4k8la1 d.21.1.3 (A:1-332) automated matches {Ochrobactrum anthropi [TaxId: 439375]}
mrstkvihivgchaegevgdvivggvapppgktvweqsrfiasdetlrnfvlneprggvf
rhvnllvppkdpraqmgfiimepadtppmsgsnsicvstvlldsgiipmqepvtrmvlea
pgglieveaecrngkaerisvrnvpsfadrlnasleveglgtitvdtayggdsfvivdaa
sigmkiepgqarelaeigvkitkaaneqlgfrhpekdwnhisfcqitepvtrdgdiltgv
ntvairpakldrsptgtgcsarmavlhakgqmkvgerfigksvlgtefhcrldktlelgg
kpaispiisgrawvtgtsqlmldpsdpfpsgy

Sequence, based on observed residues (ATOM records): (download)

>d4k8la1 d.21.1.3 (A:1-332) automated matches {Ochrobactrum anthropi [TaxId: 439375]}
mrstkvihivgchaegevgdvivggvapppgktvweqsrfiasdetlrnfvlneprggvf
rhvnllvppkdpraqmgfiimepadtppmsgsnsicvstvlldsgiipmqepvtrmvlea
pgglieveaecrngkaerisvrnvpsfadrlnaslevgtitvdtayggdsfvivdaasig
melaeigvkitkaaneqlgfrhpekdwnhisfcqitepvtrdgdiltgvntvaitgtgcs
armavlhakgqmkvgerfighcrldktlelggkpaispiisgrawvtgtsqlmldpsdpf
psgy

SCOPe Domain Coordinates for d4k8la1:

Click to download the PDB-style file with coordinates for d4k8la1.
(The format of our PDB-style files is described here.)

Timeline for d4k8la1:

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Domains from same chain:
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d4k8la2