Lineage for d4ii2b1 (4ii2 B:1-76)

  1. Root: SCOPe 2.07
  2. 2494617Class d: Alpha and beta proteins (a+b) [53931] (388 folds)
  3. 2501110Fold d.15: beta-Grasp (ubiquitin-like) [54235] (14 superfamilies)
    core: beta(2)-alpha-beta(2); mixed beta-sheet 2143
  4. 2501111Superfamily d.15.1: Ubiquitin-like [54236] (11 families) (S)
  5. 2501112Family d.15.1.1: Ubiquitin-related [54237] (39 proteins)
    Pfam PF00240
  6. 2502019Protein automated matches [190118] (17 species)
    not a true protein
  7. 2502236Species Schizosaccharomyces pombe [TaxId:284812] [196615] (2 PDB entries)
  8. 2502237Domain d4ii2b1: 4ii2 B:1-76 [196616]
    Other proteins in same PDB: d4ii2b2, d4ii2c1, d4ii2c2
    automated match to d3cmmb_
    complexed with atp, edo, mg, pg0, so4

Details for d4ii2b1

PDB Entry: 4ii2 (more details), 2.2 Å

PDB Description: crystal structure of ubiquitin activating enzyme 1 (uba1) in complex with the ub e2 ubc4, ubiquitin, and atp/mg
PDB Compounds: (B:) ubiquitin-60s ribosomal protein l40

SCOPe Domain Sequences for d4ii2b1:

Sequence; same for both SEQRES and ATOM records: (download)

>d4ii2b1 d.15.1.1 (B:1-76) automated matches {Schizosaccharomyces pombe [TaxId: 284812]}

SCOPe Domain Coordinates for d4ii2b1:

Click to download the PDB-style file with coordinates for d4ii2b1.
(The format of our PDB-style files is described here.)

Timeline for d4ii2b1:

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