SCOPe 2.08: Domain d3m0gb1: 3m0g B:4-287

Lineage for d3m0gb1 (3m0g B:4-287)

1. Root: SCOPe 2.08

2. Class a: All alpha proteins [46456] (290 folds)

3. Fold a.128: Terpenoid synthases [48575] (1 superfamily)
   multihelical; core: 8 helices (C-J) are arranged in 2 parallel layers

4. Superfamily a.128.1: Terpenoid synthases [48576] (6 families)
   duplication: two metal-binding sites are related by a pseudo dyad that also relates helices C-F to helices G-J

5. Family a.128.1.0: automated matches [196408] (1 protein)
   not a true family

6. Protein automated matches [196409] (46 species)
   not a true protein

7. Species Rhodobacter capsulatus [TaxId:1061] [196462] (2 PDB entries)

8. Domain d3m0gb1: 3m0g B:4-287 [196463]
   Other proteins in same PDB: d3m0ga2, d3m0gb2
   automated match to d3p8ra_

Details for d3m0gb1

PDB Entry: 3m0g, 1.9 Å

PDB Description: crystal structure of putative farnesyl diphosphate synthase from rhodobacter capsulatus

PDB Compounds: (B:) Farnesyl Diphosphate Synthase

SCOPe Domain Sequences for d3m0gb1:

Sequence, based on SEQRES records:

>d3m0gb1 a.128.1.0 (B:4-287) automated matches {Rhodobacter capsulatus [TaxId: 1061]}
serlkevqdavetamaaaigrlpagdlrdamayaaqggkrlraflaiesaaihgismaqa
mpaalavealhayslvhddmpcmdnddlrrglptvhkkwddatavlagdalqtlafelct
dpvlgsaenrvalvaalaqasgaegmvygqaldiaaetaavpltldeiirlqagktgali
sfaaqagailagadrgpltayatalglafqiaddildvegneeaagkrlgkdaeahkatf
vsllglagaksraadlvaeaeaalapygeaastlracaryvier

Sequence, based on observed residues (ATOM records):

>d3m0gb1 a.128.1.0 (B:4-287) automated matches {Rhodobacter capsulatus [TaxId: 1061]}
serlkevqdavetamaaaigrlpagdlrdamayaaqggkrlraflaiesaaihgismaqa
mpaalavealhayslvhddmpcmdnddlrrglptvhkkwddatavlagdalqtlafelct
dpvlgsaenrvalvaalaqasgaegmvygqaldiaaetaavpltldeiirlqagktgali
sfaaqagailagadrgpltayatalglafqiaddildvkatfvsllglagaksraadlva
eaeaalapygeaastlracaryvier

Timeline for d3m0gb1:

• d3m0gb1 first appeared in SCOPe 2.02, called d3m0gb_
  
• d3m0gb1 appears in SCOPe 2.07